Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00323 ATGGAAGTTATTAATGCAAATCAATGGAATAATAATGAGGCTGATGATAATGGAGTTGAAGAAATAACCTTGCAACGAAGGAGTGTTGTCCATCATAGTAGCAGCAGCAGTACCAGCAGTTCAGATATAGAAGCAAAAGGTGGAGGCCTAGACTTCATTGAATCTGAGacaaaaccaaaatttgaaatagtGATAGCAGAAAGGAATGCTGAAATGATCCTCCCAAAAGAGGATATTGATGAGACTTCATTGATGCCAATTTTACCTGCTTCTGATTCTCCTCTTCAAGAGAATTCTACATCTTTGATCAATGTGACAAATGAAAGTGAGACAGTTATCatagtaaaagaaaatggtGAAGAAAGACAAGAATTTTATTTGGACAATGTGTTTGAGAAACCACCAACACATGGATTCTATTGTCCTAATTGTAATGTTTGTATCCAAAAGGTTTATATTCAAAAGATCTACATTCAACAAAAACCTGATACAATAAGATGCACATCATGCTTCAGTTTCCTCATTCCAATAgGAAGTTGGTTATTCCCTGGGTTAGTATCTAATGATGATGGAGAATTAAATGATCAAGgtTCATTAAATATTCAAAGAAAGACCAAAGTCACAGAACAAAAATTCAAAGTTGCATCACAACATGATACTTCAGAACTTGTTCAAACTGAGGAAGTGAAACAATCTATAGCCAGAGGTCCCTCAAATTCAGTCACTAAAATTGTAGATGACTCAGGAAAAGAAACCATGCAAATCATTGAAGAACCTAAAAAAGGTTATGTTGTAACAAAAAAGAAGCATTTTTGGGGTGATTGGGGTGTTATAGGTGGCACTTCTTCTGAGACCTCTAAAAGGAAGAAACCTGAAACTGATTCTACTGATTGGAAAGTTATTGGTGAAGCTTCTTTGACCAGTTTGTCCAAGAAACCTGAagacaagaaagagaagaaagattTTGTGGAAGTTAAAGTTGTTGGAGAAACCACAGGATCTGATGAAGAAGTGGCTCCGTCCGTGACTGAAAGAACACCACTAATTACTCAAAGAGAGCCAATTGTGGAAACAAGTAACAAGGGATTGGAGATTCTGAAAAGTATTGTGTATGGTGGTTTGACTGAATCATTAGCAAGTCTTAGTGTTGTTACATCAGCAGCAAGTGCTGATGCTGCCACATTGAACATTGTTGCATTGGCTATTGCTAACCTGGTTGGTGGACTCTTTGCCCTTGGTCATAATCTAAAGGAACTAAAAGCTGAACAACCAAAAAGATCCAACACAGAAACAGTAGTGGATCAATACAAAGAAGTCCTAGGAGAGAGGAAAAATTTCATTCTTCATGCCTTTATTGCAATCTTATCATTCATTATTTTTGGACTTATTCCACCAATAGTATATGGTTTCACATTTCGtgagaatgatgaaaaagaTTTCAAGCTAGCAGCAGTTGCAGGAGCTTCACTTTTATGCATCACATTGCTTTCTATTGCTAAAGCTTATATCAAGAGACCAAACAATTACAtaacatattttcaaacagtGTTTTACTATGTTAGTACTGGTGCTGTTGCTACAGTTGCTTGTTACTTAGCTGGTGACATGGTGAAGAAACTTATTGAAAAGCTTGGATTGTTTGAACCAGCAACAAATTTTGCTTTTTCCTTGCAGCATCAATCTGGATTGCAATCGTATTAA 1701 0.3463 MEVINANQWNNNEADDNGVEEITLQRRSVVHHSSSSSTSSSDIEAKGGGLDFIESETKPKFEIVIAERNAEMILPKEDIDETSLMPILPASDSPLQENSTSLINVTNESETVIIVKENGEERQEFYLDNVFEKPPTHGFYCPNCNVCIQKVYIQKIYIQQKPDTIRCTSCFSFLIPIGSWLFPGLVSNDDGELNDQGSLNIQRKTKVTEQKFKVASQHDTSELVQTEEVKQSIARGPSNSVTKIVDDSGKETMQIIEEPKKGYVVTKKKHFWGDWGVIGGTSSETSKRKKPETDSTDWKVIGEASLTSLSKKPEDKKEKKDFVEVKVVGETTGSDEEVAPSVTERTPLITQREPIVETSNKGLEILKSIVYGGLTESLASLSVVTSAASADAATLNIVALAIANLVGGLFALGHNLKELKAEQPKRSNTETVVDQYKEVLGERKNFILHAFIAILSFIIFGLIPPIVYGFTFRENDEKDFKLAAVAGASLLCITLLSIAKAYIKRPNNYITYFQTVFYYVSTGAVATVACYLAGDMVKKLIEKLGLFEPATNFAFSLQHQSGLQSY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00323 566 MobiDBLite consensus disorder prediction 28 44 - -
Tsu08g00323 566 PANTHER GLYCINE-RICH PROTEIN FAMILY 30 559 - -
Tsu08g00323 566 MobiDBLite consensus disorder prediction 27 47 - -
Tsu08g00323 566 CDD CCC1_like 366 534 - -
Tsu08g00323 566 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 559 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00323 Tsu-Chr8 3077905 3082323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00323 - - aprc:113850747 525.013