Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00307 ATGGTGGAATTTGAAGAGGTTGAGCTTGATTTAGGGTTATCCATTGGTGGAGCTTTTAAAAAACCggttcaaaaatcaaaacccgAATTAGAATCCGGTTTAAATTCGGGTCAGAATGATGAAATGCAGAAAATGGATCAAAAGCGTGAGATTCAAGCGTTGAGGAGAATGGAGGTGAAGAGAAAACGAGAGCAAAAAAAAGGAACAGAAAACCGGTTCGGAGAACCTGAACCGGAATGTGAACCGGTTTTTAAGAAGGAGAAGATGGAGTTTGTTAACGGTGCGGTTTCTTGGATGGCTCCGTTTCAGGTTGTGCAAGCGCAACAGTATGGAGCTGTGCAGTTTGTGCCGTTAAATAACAGAATGGCGTTACCGTTTTGGGTTGGGAGTGAGAAGAATGTGCCTGGAATTGACGGTGTTAGTTTTAACGGTGGAGATGGAAAAGTGAAATCTAATGGTGATTCTTCTAGGTGTAGTTCTTCTGCTGTTTCTGATTATCAAAGCTCTTCTCGTGaagATGGAGGAAGCACAGACAGCCATAGCCGCAGCCATTCAGCTAATTCATTTGTAGAACCAACACAGTTGAAAAATTCCAAAGAATTTATCAGAAAAAACCAACCTGAAGAAATTGCATCATCTCATCCTATAAGAAATCACAACAATGTGAAAGAATCTCAAACTCATCCATACAACATGCAAAAAAATCCAATGAAACACAATGCACAACCTACTACAGTACCAATGAAAAAGCCTTTACCTCAAATGCCATATGTATCAACAAAAGGAAATGGACCAAATGGGAAAACAGTGAATGGTTTTTTATATACATATTCAAAATGTGATGAAGTTAGCATTGTTTGTGTCTGTCATGGAAGCACATTTTCACCTGCTGAGTTTGTGCAGCATGCTGGAGGCACTGATATTACACATCCTCTTAGACATATCACAGTAAATTCCTCTGCCTTTGGATGA 972 0.3889 MVEFEEVELDLGLSIGGAFKKPVQKSKPELESGLNSGQNDEMQKMDQKREIQALRRMEVKRKREQKKGTENRFGEPEPECEPVFKKEKMEFVNGAVSWMAPFQVVQAQQYGAVQFVPLNNRMALPFWVGSEKNVPGIDGVSFNGGDGKVKSNGDSSRCSSSAVSDYQSSSREDGGSTDSHSRSHSANSFVEPTQLKNSKEFIRKNQPEEIASSHPIRNHNNVKESQTHPYNMQKNPMKHNAQPTTVPMKKPLPQMPYVSTKGNGPNGKTVNGFLYTYSKCDEVSIVCVCHGSTFSPAEFVQHAGGTDITHPLRHITVNSSAFG 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00307 323 PANTHER AFP HOMOLOG 2 3 126 IPR031307 GO:0007165
Tsu08g00307 323 PANTHER AFP HOMOLOG 2 144 322 IPR031307 GO:0007165
Tsu08g00307 323 Pfam Tify domain binding domain 283 318 IPR032308 -
Tsu08g00307 323 MobiDBLite consensus disorder prediction 42 79 - -
Tsu08g00307 323 MobiDBLite consensus disorder prediction 144 240 - -
Tsu08g00307 323 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 3 126 - -
Tsu08g00307 323 PANTHER NUCLEAR TRANSPORT FACTOR 2/RNA RECOGNITION MOTIF PROTEIN 144 322 - -
Tsu08g00307 323 MobiDBLite consensus disorder prediction 148 195 - -
Tsu08g00307 323 MobiDBLite consensus disorder prediction 211 240 - -
Tsu08g00307 323 MobiDBLite consensus disorder prediction 22 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00307 Tsu-Chr8 2915406 2917027 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00307 - - mtr:MTR_8g012620 350.517