LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu08g00305	atggGATTAAAGAGGGATTCTCCTGTGGAAGTTTTGACAAGATGGTTGGAGAAGAGATCATTGAAAGTGAAGATTTTTTTGGGGATATTGCTTGCTTTTTGTGCTTTAGTGGTTTTAAAGTACACTATCAGAGAACCTGATTTTTTCTACATAGCTGCTGAATCAATCCATATTGTTGGCCTTATTGTACTCATATACAAGCTCTTTGCTCACAAGAATTGCTCAGgtttATCCCTCAAGAGCCAAGAGATCACAGCTTTATTCCTAATAACAAGATTAGGTTGTAGCATCTATATGGAGGCTAATGTGCACACTGTGCTGGATTTTATATTGCTCTTGTCAACATTATTGGTTATTTGGTTGATAAGATTCAAGTTGAAGTCTTCCTATATGAAGGAGTTTGACAACATGCGGTTATCCATTTTGGTGGTGCCTTCTGCAATATTGGCAATAGTAATCAACCCAATTACAGCTCATATACGGATAGCTCGAATAATTTGGGCATTCACCGTATTTTTGGAGACTATTTCAATACTTCCTCAACTTCGTTATATGCAAAATGCAAAGATGGTTGAAACATTTACAGGATATTATGTATTTGCTCTTGGTGTCTCAAGATTCTTTGCACTGGCTTATTGGATAATTTTTACCTATAGTACAAGAGGGGCATATCTATTTGTGTTTGGTCATGGCTATTTGTGGACGTTGGCAGCTCTTATAACAGAGATTATTCAGTCTTTCATCTTGGCAGATTTTTGTTACTATTATATGAAGAG	776	0.3595	MGLKRDSPVEVLTRWLEKRSLKVKIFLGILLAFCALVVLKYTIREPDFFYIAAESIHIVGLIVLIYKLFAHKNCSGLSLKSQEITALFLITRLGCSIYMEANVHTVLDFILLLSTLLVIWLIRFKLKSSYMKEFDNMRLSILVVPSAILAIVINPITAHIRIARIIWAFTVFLETISILPQLRYMQNAKMVETFTGYYVFALGVSRFFALAYWIIFTYSTRGAYLFVFGHGYLWTLAALITEIIQSFILADFCYYYMK	258

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu08g00305	258	PRINTS	ER lumen protein retaining receptor signature	189	203	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	PRINTS	ER lumen protein retaining receptor signature	167	187	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	PRINTS	ER lumen protein retaining receptor signature	76	96	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	PRINTS	ER lumen protein retaining receptor signature	49	68	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	PANTHER	ER LUMEN PROTEIN RETAINING RECEPTOR	1	258	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	Pfam	ER lumen protein retaining receptor	73	215	IPR000133	GO:0006621\|GO:0016021\|GO:0046923
	Tsu08g00305	258	PANTHER	ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED	1	258	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu08g00305	Tsu-Chr8	2898131	2902512	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu08g00305	1	258	Miscellaneous Gene Families	AT3G25160	55.985	2.82e-101	294

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu08g00305	-		K10949	gmx:100790733	342.043