Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00289 ATGGCATCAATGAAAGCAATGGCTATGGTTGTGATTTATCTATttctcttatcttatttattcaCCATATCAAGTGCAAAAATCTCAGGACAACCAGGAGTGAACTATGGACAACTAGGTAACAACCTTCCAACACCAATAACCTCAGTGTCTCTCATCAAAAACCTAAACGCCAAACGTGTAAAAATCTACGACGCAAATCCACAAATCCTCAAAGCCCTTGAAAACACCGGAATCCAAGTATCGATCATGCTCCCCAATGAACTCGTAACCAATGTATCCTCAAACCAAACACTTGCAGACCAATGGGTTCAATCCAATGTTGTTCCCTTTTATCCAAAGACACTAATCCGCTATCTCCTCGTCGGTAATGAACTCATATCCTCAACAACAAATCAAACATGGCCCCATATTGTACCGGCGATGCACCGGATCAAAGACTCCTTAACTACCTTTGGTTTGCATAAAATCAAAGTTGGAACCCCTTTGGCAATGGATGTTTTACAAACATCATTTCCACCTTCAAATGGAACTTTTAGAAATGACATTGCTTTGAGTGTTATCAAACCGATGTTAGAGTTTTTACATGTCACAAACTCTTTTTTCTTCATAGATGTGTATCCATTTTTTGCTTGGGTTTCGGATCCTATTAATATTAACTTGGATTATGCTCTTTTTGAATCCAATAACATCACGGTTACGGATTCGGGTACGGGTTTGGTTTATACTAATTTGTTTGATCAAATGGTGGATGCGGTTTATTTTGCAATGGAGCGGCTTGGATTCCCGAATATTCAGATATTTATTGCTGAAACGGGTTGGCCTAATGGTGGTGATTTGGACCAAATTGGTGCTAATATTCACAATGCTGCTACATATAATAgaaattttgtgaagaaagCTACAAAAAAACCTCCTACCGGGACACCGGCTCGACCAAGTTCAATTCTTCCATCTTTTATATTTGCTTTGTATAATGAGAACTTGAAAACCGGTTTGGGAACGGAGCGTCACTTTGGATTGTTGTACCCGAATGGGTCAAGTATTTACGATATTGACCTTTCTGGCAAGACACCAGAGTCGGAGTTTAAGCCATTGCCACCACCAGAGGATCATAAAGGGAAGGCATGGTGTGTTGTGGCAGATGGAGCAAACAAGACGGCGGTGGTAGAGGCGCTATCGTACGCTTGCTCGCAAGGCAACCAAACATGTGATTCAATTCAACCCGGGAAACCATGTTTTAAACCCGATACAGTGGTGGATCATGCTAGCTATGCATTTAGTTCTTATTGGTCTCAGTTTAGACATCTTGGTGGAACATGTAACTTCAACGGTCTTGCCACCCAAATTGCAAAGGATCcaagttATGGATCTTGCAAGTATCCAAGTGTGACTCTTTGA 1401 0.3997 MASMKAMAMVVIYLFLLSYLFTISSAKISGQPGVNYGQLGNNLPTPITSVSLIKNLNAKRVKIYDANPQILKALENTGIQVSIMLPNELVTNVSSNQTLADQWVQSNVVPFYPKTLIRYLLVGNELISSTTNQTWPHIVPAMHRIKDSLTTFGLHKIKVGTPLAMDVLQTSFPPSNGTFRNDIALSVIKPMLEFLHVTNSFFFIDVYPFFAWVSDPININLDYALFESNNITVTDSGTGLVYTNLFDQMVDAVYFAMERLGFPNIQIFIAETGWPNGGDLDQIGANIHNAATYNRNFVKKATKKPPTGTPARPSSILPSFIFALYNENLKTGLGTERHFGLLYPNGSSIYDIDLSGKTPESEFKPLPPPEDHKGKAWCVVADGANKTAVVEALSYACSQGNQTCDSIQPGKPCFKPDTVVDHASYAFSSYWSQFRHLGGTCNFNGLATQIAKDPSYGSCKYPSVTL 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00289 466 ProSitePatterns Glycosyl hydrolases family 17 signature. 265 278 IPR000490 GO:0004553|GO:0005975
Tsu08g00289 466 PANTHER BNAC03G35190D PROTEIN 15 458 - -
Tsu08g00289 466 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 458 IPR044965 GO:0004553|GO:0005975
Tsu08g00289 466 SUPERFAMILY (Trans)glycosidases 33 353 IPR017853 -
Tsu08g00289 466 Pfam X8 domain 377 448 IPR012946 -
Tsu08g00289 466 Gene3D - 372 464 - -
Tsu08g00289 466 SMART X8_cls 376 461 IPR012946 -
Tsu08g00289 466 Pfam Glycosyl hydrolases family 17 33 353 IPR000490 GO:0004553|GO:0005975
Tsu08g00289 466 Gene3D Glycosidases 32 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00289 Tsu-Chr8 2781214 2784720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00289 28 466 Glycoside Hydrolase AT3G23770 54.831 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00289 - - ccaj:109805358 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00289 08 2781214 2784720 Tsu08g00289 08 2781214 2784720 ECH