Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00284 ATGTCTCGTGCTCCTAATTACGAGTTTCAAGAATGGTGGAacaaacaaagagaaaaagaaaatctcGATCTATTCGAAGATAAATCAGATCAATCTTCTTCACCTTTTATAACCGTCGATGTAGACGGTAACGGTAACGGTGGTGGAAGCAAAAAAAATCGATCAGATCCATCGGTTAAAAAAGAGAGAGCACGAAGTGCGAGGCAGTTATCATGGGTTTGTTTGTTGAAATTTCAACAAATTGCAGCAACCGTTGGATTTATATCTAACGGTTTACTTCATGTTGTGAAGACGGCGAATCGGAGGATTTTATCGCGTGATTCCCCTATTGATTCGTCGTCTTCAAGGCTTTATAGAGCAATCAGGGTGTTTTTGATTGTTGTGATTGGTTTGTTAGGGTTTGAGTTGGTTGCTTATTTTAAAGGTTGGCATTTTCGGCCTCCTTCGGTTGGGTCTGCTGATGTTTTGGGATTGGTTGCGGTGTTTTACGCGAGATGGATTGATATTCGGGCGAATTATTTGGCGCCGCCTTTGCAGAGTTTGACGAATATGTGTATTGTTTTGTTTATTGTGCAATCGGTGGATaggattgttttgattttgggatGTTTTTGGATCAAGTTTAGGAGAATTAGACCTATTGCTAGTATTGAATATGATGGAAGTGTTGCTAGTGTTGATTATCCTATGGTTTTGGTTCAGATTCCTATGTGCAATGAAAGGGAGGTTTACCATCAATCGATTGCAGCAGTTAGTATCATGGATTGGCCAAAGGAGAGAATGCTTGTACAAGTTCTTGATGATTCGGATGATGTGGATATCCAAAACCTCATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATTATATATAGACATAGGCTTATGCGTACAGGATACAAGGCAGGGAATCTTAAATCTGCAATGGGTTGTGATTATGTAAAGGATTATGAGTATGTGGCAATATTTGATGCTGATTTCCAGCCAACGCCAGATTTCTTAAAGAAGACAATACCTTATTTCAAGGGAAGGGATGATTTGGCATTAGTCCAGGCAAGATGGGCATTTGTGAACAAGGATGAAAACTTGCTTACAAGATTACAGAatatcaatttatctttccACTTTGAGGTTGAACAGCAAGTGAATGGTATCTTCATTAACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTAGAGGATAGTGGTGGCTGGTTAGAGCGAACAACTGTTGAGGACATGGACATTGCTGTTCGAGCTCATCTCTGTGGGTGGaagtttatttttctcaatgaTGTTAAGTGCCTCTGTGAGCTTCCAGAGACATATGAGGCTTATAAAAAACAACAGCACCGCTGGCATTCTGGTCCAATGCAATTGTTTCGTTTGTGTTTTGTTGATATACTTCGCGCTAAGATTAGTTGGccaaagaaattcaatttgaTATTTCTTTTCTTCCTGCTGAGGAAGCTTATTCTGCCATTTTATTCGTTCACCCTCTTCTGCATCATTCTTCCATTGACCATGTTCCTTCCGGAAGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCTGGAGTCATGTCTATCCTAGGTGTTCTTCCAGCCCCACGGTCATTTCCATTTATAGTGCCTTATCTTCTGTTTGAGAACACTATGTCAGTAACCAAATTTAATGCAATGATATCTGGATTATTTCGCTTCGGAAGTTCTTATGAATGGGTGGTTACTAAAAAATTGGGAAGATCATCAGAGACAGATTTGGTTGCCTTCGAAAAGGAATCCGAACCTCTAATGCGATCCAATAGTCTTCTTCATAGATCTAACTCAGATTCCGGCATTGAAGAACTAAGCAAACTAGAACTTTCAAAGATAGCTCCGAAGACGAAGAAAAATCGTCTCTACAGGAAAGAACTTGCTCTTGCATTTATTTTGTTAACGGCCTCAGTTAGAAGCTTACTATCTGCTCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGGGTAAGTTTTTTGGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTTAGTTAA 2079 0.3862 MSRAPNYEFQEWWNKQREKENLDLFEDKSDQSSSPFITVDVDGNGNGGGSKKNRSDPSVKKERARSARQLSWVCLLKFQQIAATVGFISNGLLHVVKTANRRILSRDSPIDSSSSRLYRAIRVFLIVVIGLLGFELVAYFKGWHFRPPSVGSADVLGLVAVFYARWIDIRANYLAPPLQSLTNMCIVLFIVQSVDRIVLILGCFWIKFRRIRPIASIEYDGSVASVDYPMVLVQIPMCNEREVYHQSIAAVSIMDWPKERMLVQVLDDSDDVDIQNLIKAEVHKWQQRGVRIIYRHRLMRTGYKAGNLKSAMGCDYVKDYEYVAIFDADFQPTPDFLKKTIPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRLCFVDILRAKISWPKKFNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSILGVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAFEKESEPLMRSNSLLHRSNSDSGIEELSKLELSKIAPKTKKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00284 692 Pfam Glycosyl transferase family group 2 322 519 IPR001173 -
Tsu08g00284 692 PANTHER - 29 691 - -
Tsu08g00284 692 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 521 IPR029044 -
Tsu08g00284 692 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 221 446 IPR029044 -
Tsu08g00284 692 MobiDBLite consensus disorder prediction 25 61 - -
Tsu08g00284 692 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 29 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00284 Tsu-Chr8 2732501 2739005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00284 1 692 Miscellaneous Gene Families AT3G07330 72.884 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00284 - - gmx:100801779 1095.88