Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00254 ATGGAGTTCATCCAGAGCCGCGTTGAGCCATGGATGAGGGAACAAGGAGCTAGACTCATGAAGGTTTCGTGGGGTCCACTTCAATGGCGTATGAGATGGCCATGGACTAACCACCGTGAACAGAAGAAACGGATCAAGGAAGAGTATGAACGGCGTCGGAAACAGCTCAATGATCTCTGTCTCGCTCTTAAAACTGAGTCTCTCTCCGATTTGCAGGATCTTCTTTGTTGCATGGTTCTATCTGAGTGTGTTTACAagAGGCCTGCTACTGAGATGATTCGAGCTGTAAATAAATTTAAGTCCGATTTTGGAGGACAAATTGTTGCTTTGGAGAGGGTGCAACCTTCATCAGATCATGTTCCTCATAGGTATTTATTGGCAGAGGCTGGGGACACTTTATTTGCTTCAtttataggaacaaaacaataCAAGGATGTAATTGCTGATGCAAATATACTTCAAGGTGCAATCTTTCATGAGGACGCTGCTGAAGAATCTGACGCACATGCAGAAACTGAATCTGATAAGGGTGAAAACCAAAGTGGAAAAGAATATACGTGGAATCCTCTAGAATCCAGGTCTAGACAAATGAAGAGTAAATATAAACCTGCTGTCCATAGGGGTTTCATGGCCCGTGCTAAAGGAATACCTGCATTAGAATTGTACAGGCTTGCTCAAAAGAAGAAATGCAAGCTTGTTTTGTGTGGCCATTCACTTGGAGGAGCAGTAGCTGCATTAGCTACTCTTGCCATTTTGAGAGTAATTGctgcttcatcttcatcaaaggAAAATGGGAATGTCTCTGTCAAATGTATTACATTTTCTCAACCGCCTGTTGGAAATGCTGCTttgaaggactaCATTAATAGAAAAGGTTGGCAGCATTATTTCAAGAGTTATTGCATCCCTGAAGATTTGGTTCCCCGTATTTTATCTCCTGCATATTTTCGCCATTATAATGCTCAGTCTGTGGCAGTGCCTTCTCAAACTGAAACCAACAGCTTATTATTGAGAGAACTGGATGAAGGGGTAACAAAACCAAAAGCCAATGATGGAGAACAGTTGGTTTTGGGAGTAGGTCCTGTGCAGAAATCCTTCTGGAGACTTTCAAGGCTAGTCCCTATAGAAGGATTGCGAAGACAATTTAGTAAACACCAAGAAAGCAGAATAAATTCTGTTGAAACAAATTCATTGCCTGATTCTCTTGCTGATACCTTGATTGAGGAGGAAGCGGTTCAACCACGGTCACTTGAAATACAAGAGAGTTCTGATGGCATATCGCTCAAGCCTTTTCCTGAAACTGATAAACATTCATTGGAGGTGTCAACAAATGGGAAAACAAATGCAAAGACCAATAACATAAATGGTGATGAAGGAAAATGGAACAGAGTACCTTATTTACCATCATATGTACCATTTGGACAGCTTTATTTATTGGAGAATTCCTCTGTAGAGTCACTATCTGGTGCAGAGTACTCGAAGTTGACATCGGTCAGATCAGTGATTGCTGAATTGAGGGAAAGATTTCAATCACATTCAATGAGATCATATCGATCTCGGTTTCAGAGAATCTTTGACTTATGTATGAATGATGATGCATCATCTTTCTTAGGGATTGAGCAATGGCACCAGGCTTCTCATCTACAGCAATGGCTTGGGCTTGCTGCTGCAGACACTGTTGAGCTTGGGCATATAGTAGAGTCTCCTACTATTCGAACTGCAACTTCTATTGTTCCTCTAGGATGGAATGGTGTGCCTGGAGCGAAAAATGGAGAACCTCTGAAAGTTGATATTACTGGTTTTGGGTTGCATCTCTGTACACTTGTTCATGCTCAAGTGAATGGTGACTGGTGTTCAACTACAGTGGAATCCTATCCATCTGCACCAAACTATTCTTCAAATCAAGAAATTCAGTCTGAGTTACAGAAGATGAGAATAATAGTTGGTGCTCCGCAAAGAACACCTCCAAAACATCAAACTGTGTTAGACTCTTTGATGCCTGGTTTTACCTCTGTTGATTCAAAGACTGCTTGTAGTTCAGCACCTGTTGACATGGATACGTCTGTCCGTCCGGAAAGTTTAAATAACTTTATAATATTTTGCACCAGTGATTTTACAACTGTTTCCAAAGAGGTTCATTTGAGAACCCGTAGAGTACGATTAGTTGGGCTGGAGGTATAG 2181 0.4053 MEFIQSRVEPWMREQGARLMKVSWGPLQWRMRWPWTNHREQKKRIKEEYERRRKQLNDLCLALKTESLSDLQDLLCCMVLSECVYKRPATEMIRAVNKFKSDFGGQIVALERVQPSSDHVPHRYLLAEAGDTLFASFIGTKQYKDVIADANILQGAIFHEDAAEESDAHAETESDKGENQSGKEYTWNPLESRSRQMKSKYKPAVHRGFMARAKGIPALELYRLAQKKKCKLVLCGHSLGGAVAALATLAILRVIAASSSSKENGNVSVKCITFSQPPVGNAALKDYINRKGWQHYFKSYCIPEDLVPRILSPAYFRHYNAQSVAVPSQTETNSLLLRELDEGVTKPKANDGEQLVLGVGPVQKSFWRLSRLVPIEGLRRQFSKHQESRINSVETNSLPDSLADTLIEEEAVQPRSLEIQESSDGISLKPFPETDKHSLEVSTNGKTNAKTNNINGDEGKWNRVPYLPSYVPFGQLYLLENSSVESLSGAEYSKLTSVRSVIAELRERFQSHSMRSYRSRFQRIFDLCMNDDASSFLGIEQWHQASHLQQWLGLAAADTVELGHIVESPTIRTATSIVPLGWNGVPGAKNGEPLKVDITGFGLHLCTLVHAQVNGDWCSTTVESYPSAPNYSSNQEIQSELQKMRIIVGAPQRTPPKHQTVLDSLMPGFTSVDSKTACSSAPVDMDTSVRPESLNNFIIFCTSDFTTVSKEVHLRTRRVRLVGLEV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00254 726 MobiDBLite consensus disorder prediction 164 197 - -
Tsu08g00254 726 Gene3D alpha/beta hydrolase 71 345 IPR029058 -
Tsu08g00254 726 Pfam Lipase (class 3) 193 310 IPR002921 GO:0006629
Tsu08g00254 726 MobiDBLite consensus disorder prediction 164 180 - -
Tsu08g00254 726 SUPERFAMILY alpha/beta-Hydrolases 69 319 IPR029058 -
Tsu08g00254 726 PANTHER F21O3.11 PROTEIN 28 725 - -
Tsu08g00254 726 MobiDBLite consensus disorder prediction 418 454 - -
Tsu08g00254 726 Coils Coil 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00254 Tsu-Chr8 2261046 2270576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00254 1 725 Acyl Lipid Metabolism Gene Families AT3G07400 63.315 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00254 - - gmx:100797051 1169.84