Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00247 ATGGATCAAGAATATCACTTCAAGAGGAACCATGTACCAGCATTTGGAAGCTGGGATTGGAATGATAATTTACCATTCACACAGTGCTTTGAATCAGCAAGACAAGGTGGTTTTTTACACTATACTTACTCAGAAACTCATCAAGATCAAGATCTTTATGTTACTGGTGATTTGTATGATAATCATGTTGTTACTCCTGCAATGATTGTTGTTCCTCGTAGAAGGGAAAAGGTACGTTCCCAACATGAAAAAGATATGAAAAAGCAAAATTGGGTGAAGGAACCACCAAGCCCAACTCCAATGTCAAGACCAACACCAAAGCCTGTTGATGAAGACTTATACAAAATTTCACCAGACCTTCTTTATGTCAAAACTAGGAAGAAGAGAGGGATATGTTTCTTTCCAAGTTGCTTTTGTATTGCATGA 426 0.3756 MDQEYHFKRNHVPAFGSWDWNDNLPFTQCFESARQGGFLHYTYSETHQDQDLYVTGDLYDNHVVTPAMIVVPRRREKVRSQHEKDMKKQNWVKEPPSPTPMSRPTPKPVDEDLYKISPDLLYVKTRKKRGICFFPSCFCIA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00247 141 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 5 139 - -
Tsu08g00247 141 MobiDBLite consensus disorder prediction 74 91 - -
Tsu08g00247 141 PANTHER EXPRESSED PROTEIN 5 139 - -
Tsu08g00247 141 MobiDBLite consensus disorder prediction 74 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00247 Tsu-Chr8 2226110 2228828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00247 - - gmx:100306260 220.705