Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00245 ATGAATCAAACCTCCGAGTCAGGCTTTGAAAATCTAATTGGCTATTACGAACCTCAAGTTCAAGAGCTTATTGTTATTGATGAAGTGCTATCTGCTATGGTTGGGATTGAAGGACGTTACATTTCAATCAAAACACTTCGTGGAAAGAAGGATGAGATAATTAATTTCCTGGTGGACCCATCTATGGATTCGGCACTGCAGGAGTTGGCAAAACGGATATTCCCTCTTTGTAGGAGCTTTCTGTTGATCAACCAATTTGTGGAATCAAGGTCTCAATTTCAGAATGGGCTAGTTAATCATGCCTTTTCTGCTGCACTTAGGGCATTCCTTCTCGATTACCAGCTCATGGTGTCACAACTTGAGCACCAATTTCGGCTTGGGAGACTTTCCCTTCAAGGATTGTGGTTCTACTGTCAGCCCACGTTGAGGTCAATGCAGGCATTGTCTACTGTCATACAGAAGGCTTCAGTCAACAATTTTTCTGGTTCTGCCGTTCTTAACTTACTGCAGAGCCAGGCAAAGGCTATGGCAGGAGATATTCAAGTTAGGTTGTTGCTGGAGAAAATGACACAATGTGCAAGTAGGGCCTACATGAGCATATTGGAAAGATGGGTCTATGAAGGAGTAATAGACGATCCTTATGGCGAGTTTTTCATTGCAGAAGACAAATCCCTTCCAAAGGAGAGTCTCACTAAAGATTATGATGCTAAGTATTGGCGGCAACGTTACAGCCTCAAAGATGGAATTCCTAGTTTCCTTGCAAATATTGCAGGAACAATTTTGACCACAGGAAAATATCTAAATGTCATGAGAGAATGTGGACACAATGTTCAGGTCCCTCCATCAGAAAATTCAAAACTAACGAGCTTTGGCTCAAATCATCATTATCTCGAATGTATTAAGGCTGCTTATAACTTTGCAAGTGGTGAACTCGTGAATCTCATTAAGGAAAAGTATGATCTTACAGGAAAATTGCGGTCTATAAAACACTACCTTCTTCTTGATCAGGGGGATTTCTTGGTACATTTTATGGATATTGCTCGAGATGAGCTGGCCAAAAAACCCGATGAAGTCTCAGTTGAGAAGCTGCAGTCTCTTCTAGACCTTGCTTTGCGTACAACAGCAGCTGCAGTCGATCCTTATCATGAAGGCTTAACCTGTATTGTGGAAAGGTCATCTTTGCTTAAAAGGTTGGGTACATTTAATGTTACTGAAGTTAGCCAGAGAGAATCCAGTACTAATGATATTCTGGAGGAGCCTGTTAGCATCACCGGCCTTGAAACATTTTCACTAAGTTATAAGGTGCACTGGCCCCTGTCTATAGTATTATCACGTAAAGCCCTTACAAAGTACCAGTTAATTTTTCGATTTCTTTTCCACTGCAAACATGTTGACCGTCAGCTATGTGGAGCATGGCAAACACATCAAGGAGTTCGTGCTCTCAATACACGTGGAACTGCTATCTCCAGATCATCTCTTCTGTGCCGAAGTATGCTTAAATTTATCAACAGCCTTTTGCATTATCTAACATTTGAGgttattGAACCCAATTGGCATATGATGTATACCAGACTTCAGTCAGCAAATAGCATAGATGAGGTTATACAACATCATGATTTTTTCCTCGATAAATGTTTGAGGGAGTGTTTGCTACTTTTACCCGAGTTGCTGAAGAAAGTGGAGAGGCTTAAATCCATGTGCCTACAATATGCAGCCGCAACACAGTGGCTTATATCATCTTCTATCGTATTTCATAGTCCAGATGAACCTAAAGCTGAGTCAATTGGAGCTAAACAATCAAAATCAGGTCAGGTCCGGAAGTCAACCACCAGAAATGTGGCAGTCACTGAATCTATTCTCAAATTTGAGAAGGAATTTGATACCGAACTTCAGAGTCTTGGATCAATCTTGAGTAGTAGCTCCCAGGCAGAGCCATATTTGGCCCATCTTGCAAAATGGGTTCTTGGTGTTAAACACGAACAGAATGGTTTATGA 1995 0.4115 MNQTSESGFENLIGYYEPQVQELIVIDEVLSAMVGIEGRYISIKTLRGKKDEIINFLVDPSMDSALQELAKRIFPLCRSFLLINQFVESRSQFQNGLVNHAFSAALRAFLLDYQLMVSQLEHQFRLGRLSLQGLWFYCQPTLRSMQALSTVIQKASVNNFSGSAVLNLLQSQAKAMAGDIQVRLLLEKMTQCASRAYMSILERWVYEGVIDDPYGEFFIAEDKSLPKESLTKDYDAKYWRQRYSLKDGIPSFLANIAGTILTTGKYLNVMRECGHNVQVPPSENSKLTSFGSNHHYLECIKAAYNFASGELVNLIKEKYDLTGKLRSIKHYLLLDQGDFLVHFMDIARDELAKKPDEVSVEKLQSLLDLALRTTAAAVDPYHEGLTCIVERSSLLKRLGTFNVTEVSQRESSTNDILEEPVSITGLETFSLSYKVHWPLSIVLSRKALTKYQLIFRFLFHCKHVDRQLCGAWQTHQGVRALNTRGTAISRSSLLCRSMLKFINSLLHYLTFEVIEPNWHMMYTRLQSANSIDEVIQHHDFFLDKCLRECLLLLPELLKKVERLKSMCLQYAAATQWLISSSIVFHSPDEPKAESIGAKQSKSGQVRKSTTRNVAVTESILKFEKEFDTELQSLGSILSSSSQAEPYLAHLAKWVLGVKHEQNGL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00245 664 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 12 655 - -
Tsu08g00245 664 Pfam Gamma tubulin complex component N-terminal 26 318 IPR041470 -
Tsu08g00245 664 Pfam Gamma tubulin complex component C-terminal 321 650 IPR040457 GO:0043015
Tsu08g00245 664 Gene3D - 321 654 IPR042241 -
Tsu08g00245 664 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 12 655 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00245 Tsu-Chr8 2202165 2210334 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00245 K16569 - gmx:100795585 1105.12