Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00225 ATGActacaaagaaaaaacacattGAAGAgataagaaggaaaaaattcTCTATTGGTGGAAAACGAGCAAATCCTTTGACTGAAGATCTTCATCAAGCTGTCAAGAATCTCTCAGCTGAACTTTATACCACAGATGTTCATTTTCTCATGGAACTCATTCAGAATGCTGAAGATAACCAATATGTTATAGGAGTGAGACCAACATTGGAGTTCATCATAACTTCAAAGGACATAACAGCAACTGGCGCTCCAGCCACGTTACTTATTTTCAACAATGAAAAAGGTTTCTCTCGCGAAAACATTGAGTCTCTCTGCAGTGTTGGACGATCAACAAAGAAAGGCAATAGAAGCAGCGGTTACATCGGTGAAAAAGGAATTGGTTTCAAGAGTGTGTTTCTAATTTCTGATCAGCCTTATATTTTTAGCAACGGATATCAGATAAGGTTCAATGAGAGACCCTGTCCACATTGCAGTCTTGGGTATATAGTTCCTGAATGGGTTGATGAGAAGCCAACCCTTCATGACATAGAGCAGATATATGGTGCTGGTAAAGATTCCCTTCCAACTACAACAATTGTCTTGCCTCTGAAGCCAGACAAGGTAAATCCTGTGAAACAGCAACTTTCAAGCATTCACCCGGAAGTTTTATTGTTCCTTTCAAAAATCAGACACCTTTCTGTCAGAGAAGATAATGAGGACCCTAAAAAGAATTCTGTAACTACTGTATCTATTTCAAGTGAGATTAACTTTGTGACGGTGAAAAACATGAATGCGGAGTCTTACACAATCCATCTATCTGCGGGGGAAAATAGTGATGACGAAGAGATATGCAGCTACTACATGTGGAAGCAAAAGTTTCCTGTCAAGTTGGAAAATGTTGCGGAAAGGAGAATGGGTTTGGAAGAATATGTTGTGACATTGGCCTTCCCACATCATGAGAGGATTCACAAGGATAAGAGTTTACCAGGTGTTTATGCATTTCTTCCTACAGAGATAGTCACAAATTTTCCCTTCATAATTCAAGCAGATTTTATCCTTGCCTCATCGAGGGAGACAATTCTCTTGGATGATAAGTGGAATCAAGGGATACTTGAATATGTTCCATCAGCTTATATAAATGCATTCAAAACACTTGTCACTGGTTCAGATGAAGCTCCGGTGTCCAACTTGCCTTGTATGTTCAGGTTCCTTCCAATTCATAGTTCTTCTTATGAGAACTTCAATCATGTGAGGCAGAAAATCAAAGCAAAACTGgatgaagaaaaaattgtaCCTATTGAGACATTCACAAACCAGAAGCACTTCTATAAGCCTCGTGAAGTTAGCAGGTTATTTCCTAAATTTTGGAATATTTTGAGGAAGGCCCAGCAGGAAGGAGTGTACTTGCTTGATCTATCTTCTCATGATGGGGTGAAAATTTTGAGTTCTTCATTTGATAAAAGAGAGTATGATGACGTACTCAAATTTTTAGGGGTGAAACAAGTGAAGATTGATTGGTATGCAATGTGTATACAGAGTTCTAATCTTGTCGATGGAGTATCAGAAGATATCTATCTTGAGCTTTTACATTTTGTTGCGAAAAACTGGTCATCGTTTATGTACTCGAGCATCTGTTACATTCCATTGATTAAATATGTGGTTTCTGATGGAATTTCGTCGTTTTTAACTCTTGATGAAATCAAACTCAAGATAGTTGTTCTAGCAGACACAAGTCAGAATTGTCCCTGTTCTTGGCTGATCAATTGGAACAATGTATTTACATTTGCAACAAATCAGTGTTTTATGCCTGAAAGCACACAACAAGCTATCGCCCACTTTTCCTATGAGAAAGATTTGATGGATTGGTTAGCAAAAGATATTAATGTTCATACTCTTAATGTGTACGATTTTGCAGAAAACGTCTGCAGTTATATTGATTACGACAGCAAGCTTGGCATTGCATTTGCTCATTTCTTATACCACTCCTTGTCAAATGGTTATTTGTCAAGTTATGATGTTGATGATCTATGCAGTTCTATGCCACTTGTGGACAACTATGGACGAACAACTATAAGCAGAAATGGGGTTCTCCTGCCTGCAAATGTGAGCAAATGGGCAGACTTGATTGTTTCTAATCCATGGAGAAATGAGAATTACGTTGAGCTAGGAAGGGCGTACCTAAATCCAACTTCTTATGCAGGTCAACATACGGATTCCGGGGAGCTTATTAATTTCCTCAAAAACCATGTCAAAGCTTCCGACATCCCTTTTATAAATCCTCCAAATGCTGGGTTTTCAGCTGCAGATACACCACTTACCAAAGACAATGCCTTTTTGCTTTTGGATTGGATTCAGAAAATGAATAGAAGGGGGGTTGACCTTCCAGAGAGATTCTTGGAGTGCATAAAAGACGGGAGATGGCTTAAAGTTTCAGGTAATGGATACACGTCTCCTTCAAAGTCATTCTTAATTGGCTCAAAATTGGGAAAACTTTTGCAGAGTGGTTCGGTTCTTGTTGACATTCCCCTGGTTGATGAGAGCTTCTATGGGAAAAGAATAAATAAGTACAAAGAGGAGTTGAAAATAGTTGGAGTGATGTTCAGTTATGAGGATGCATGTAAATTCATTGGAAGAGAGCTAATGTCTCGTGcagcttctttttctttaagtaATAATCATGTTCTTTTGATGCTTAACTTCATCCAATATCTCAGGACAAGTATTCTCCCTTTGAACGAATTTGTGGACAGCATCAAAGAGGGAAGTTGGCTAAAGACATCACATGGTTTTAGGTCTCCTATGGGATCTGTATTGAGTGGTAAAGGATGGAGAGTTGCATCACAAATTAGTGATATACCATTCATCGATCATGATCATTTCGGTGAGGAAATATATAACTACAAAGAGGAGCTCAAATTGCTGGGAGTGATAGTTGATTTACGTGGAAATCACCAAGTTGTTACACAGTATTTAAAATCACCCCCAAATTTGGACTCTATGACAGCTGAGGCTGTTCTTTTGATAATGGAATGCATCAAAAACTCAGATGTTCCTATTGAAGTATTTGATTCGGTAAAGGGAGCAAGCTGCTTGAAGACAAACATGGGTTTCAAAACACCAGGTGAATGTTTTCTGTATGATCCAGTGTGGGGCTGCATTTTGGAGGTATTCAATGGTCTTCCTGTTATTGATCATAAATTTTATGGGAAGGAGATTTTCAGGTACAAAGATGAATTGAAGGAAACAGGAGTAGTGGTTGATTTTATGGATGCCATCAAAAGATTTGCCAGTCTCTTTGAACAAAAGGCATTGGAAACTTCAATTGACCAAAAACATGTAATGTCATTACTCTCTTGTTACAGGCTGCTGAAGGGAACTGACTATAGTTTTCCTTCAAATATCTTAACCATGATATGTGAAATGAAATGGTTGCATACTACGGTTGATGGTTTTAGGTGCCCAAGAAAATGCATTTTATATGGTCCGGAGTGGAAATCAATATCTTTTATAACTTGTCTCCCTTTCATTGATTACAGTGACAAATGTAGTGGTATGAAAATGCACGAGTACAAGGAAGAACTGAAAAGCATTGGCGTTGTTACTGAATTGAAAGATGGAGTGAGGTTTGTTCCTGAATGTCTGAATTTTCCTTCAAATCCATCCACTATTACTCCTAAAAGTGTGTTTTCTTTGCTGGAATGCATCCGACTTCTAATGCAAGTTCACAAACATGCAATAGAAGATGATTTCAAAAAAGGTTTGTCGAAAAATTGGTTGAAGACACATGCTGGTTATAGGCCACCAGAGAGGTGTTTGTTGTTTGATTCCAAGTGGAGTTCTTTCCTGAATCCAACTGATGGGCCTTTTATTGATCAGAATTTTTATGGACCTGAAATTGCATCTTTCGAGAAAGAACTCAATGCAATAGGGGTCATTAGTGAAGTTGAGAAAGGGTGCTCTTTGCTTTTCAGTCACCTCGAGTCTCTCTCTGATCATGGTACCATTGTGAAAATATATAAGTACTTACAAGAACACAAATGGAAACCTGAGGAGAAAGACGCAAAAAACAATATTTGGATTCTGGATGGAACTAAAGGTGGCAAGTGGGTTGATTCTGAAGTTTGGATTATGGATGGAACTAAAGGTGGCATTGTGGATATCTATGATAGGAATATTCTTGGTTTTTTCAATACATTGGAAGTCAAGAGAAAGCCCTCACTAGATGATTATGTGGAGCTTTGGAATGATTGGGGGAGTTCAGTGAGGCAATTGTCATATGATGAGTGCTGCAAGTTTTGGACGACTATCTCCAAACATTTGAGCgcaaaagaagagaaaaaactTGCTGAGAGTTTGATGAAACTACCTGCAACATCaggaaataataaaatatatctgGTAGATAAGCAAGATGCTTTTATTCCTGATAACCTACACATGAAGAAGCTTTTTGAGATGGAAAGAGTTTTTGTATGGTATCCTAAGCATAACTTAACACCATCATTGAGGTGTGAATTATCTGATATTTATAGAAAGATTGGTGCTAGAAATATCTCTGAATCACTATGCAGAGAAGAATCATCCTTAGCGAATGATGGTGTTAAACTGAAGCATGTTGATCCAAATGACATTTTCAACTTAAAGGGGTTGGTTAAGCTTATTCTTGGTTCTCTTGCTTGTTCTAGCTTGGCAATGGAACCAAAAAAGAGACATGAAGCTGTTCAAAGTCTTCTCAGCTTGAGTTTCCATGAGACAAAGGAGCCAATCAATGTAAGCTATAGTTTACCATTATCAAATGGGGAAACAATTACAAAGAAAGCAAACAAAAGGGTACGTTGGGAAAGTCAAAGTTCTATGTTTATAATCCAGAAGATGGATAGAGATTGCAGTGATGCAATGAAACATGCTACAAATTTCTCTGAAGCAATATCTGAAGGTGTTTTGCGTGAATATCATGATCATGTTCCTGCACTCGCTGAACTAATCACATGCGGTttttttctgaaatttaaaaatgaagaaattgattttCTAATGGAATCCAAGAATCTGCAGATTGATCATGAGGATGAGGAGTTCCTCCGTTCTGCCTTCGCTTCTGGCTAA 5085 0.3727 MTTKKKHIEEIRRKKFSIGGKRANPLTEDLHQAVKNLSAELYTTDVHFLMELIQNAEDNQYVIGVRPTLEFIITSKDITATGAPATLLIFNNEKGFSRENIESLCSVGRSTKKGNRSSGYIGEKGIGFKSVFLISDQPYIFSNGYQIRFNERPCPHCSLGYIVPEWVDEKPTLHDIEQIYGAGKDSLPTTTIVLPLKPDKVNPVKQQLSSIHPEVLLFLSKIRHLSVREDNEDPKKNSVTTVSISSEINFVTVKNMNAESYTIHLSAGENSDDEEICSYYMWKQKFPVKLENVAERRMGLEEYVVTLAFPHHERIHKDKSLPGVYAFLPTEIVTNFPFIIQADFILASSRETILLDDKWNQGILEYVPSAYINAFKTLVTGSDEAPVSNLPCMFRFLPIHSSSYENFNHVRQKIKAKLDEEKIVPIETFTNQKHFYKPREVSRLFPKFWNILRKAQQEGVYLLDLSSHDGVKILSSSFDKREYDDVLKFLGVKQVKIDWYAMCIQSSNLVDGVSEDIYLELLHFVAKNWSSFMYSSICYIPLIKYVVSDGISSFLTLDEIKLKIVVLADTSQNCPCSWLINWNNVFTFATNQCFMPESTQQAIAHFSYEKDLMDWLAKDINVHTLNVYDFAENVCSYIDYDSKLGIAFAHFLYHSLSNGYLSSYDVDDLCSSMPLVDNYGRTTISRNGVLLPANVSKWADLIVSNPWRNENYVELGRAYLNPTSYAGQHTDSGELINFLKNHVKASDIPFINPPNAGFSAADTPLTKDNAFLLLDWIQKMNRRGVDLPERFLECIKDGRWLKVSGNGYTSPSKSFLIGSKLGKLLQSGSVLVDIPLVDESFYGKRINKYKEELKIVGVMFSYEDACKFIGRELMSRAASFSLSNNHVLLMLNFIQYLRTSILPLNEFVDSIKEGSWLKTSHGFRSPMGSVLSGKGWRVASQISDIPFIDHDHFGEEIYNYKEELKLLGVIVDLRGNHQVVTQYLKSPPNLDSMTAEAVLLIMECIKNSDVPIEVFDSVKGASCLKTNMGFKTPGECFLYDPVWGCILEVFNGLPVIDHKFYGKEIFRYKDELKETGVVVDFMDAIKRFASLFEQKALETSIDQKHVMSLLSCYRLLKGTDYSFPSNILTMICEMKWLHTTVDGFRCPRKCILYGPEWKSISFITCLPFIDYSDKCSGMKMHEYKEELKSIGVVTELKDGVRFVPECLNFPSNPSTITPKSVFSLLECIRLLMQVHKHAIEDDFKKGLSKNWLKTHAGYRPPERCLLFDSKWSSFLNPTDGPFIDQNFYGPEIASFEKELNAIGVISEVEKGCSLLFSHLESLSDHGTIVKIYKYLQEHKWKPEEKDAKNNIWILDGTKGGKWVDSEVWIMDGTKGGIVDIYDRNILGFFNTLEVKRKPSLDDYVELWNDWGSSVRQLSYDECCKFWTTISKHLSAKEEKKLAESLMKLPATSGNNKIYLVDKQDAFIPDNLHMKKLFEMERVFVWYPKHNLTPSLRCELSDIYRKIGARNISESLCREESSLANDGVKLKHVDPNDIFNLKGLVKLILGSLACSSLAMEPKKRHEAVQSLLSLSFHETKEPINVSYSLPLSNGETITKKANKRVRWESQSSMFIIQKMDRDCSDAMKHATNFSEAISEGVLREYHDHVPALAELITCGFFLKFKNEEIDFLMESKNLQIDHEDEEFLRSAFASG 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00225 1694 Gene3D - 13 216 IPR036890 -
Tsu08g00225 1694 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 29 203 IPR036890 -
Tsu08g00225 1694 PANTHER WU:FJ29H11 5 1691 - -
Tsu08g00225 1694 PANTHER ATP/DNA BINDING PROTEIN-RELATED 5 1691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00225 Tsu-Chr8 2015687 2023706 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00225 - - gmx:100800765 2306.95