Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00214 ATGGCTTCTACAAGTGCTGCTTCCACTTTCCTTCAGTttcattctctttcttcttctcaacTTTTCATCACCAAACTATCTAATAATAACCATATctccctttctttttcttcttccaaacaaacttctaattaTAAGCGCTTTTATGCAAAAGCTGTTTCTACAGACTCACAAAAACCTCTTACTCAGGATAAACAAAACACTccctcatcatcatcttccaaaCTGGTCCTTGTTCTTGGTGCCTCAGGAGGTGTTGGGCAGCTAGTTACAGCATCATTGCTTCAACGGAATATTAAGTCGCGCTTGATTCTTAGGGATCTTGAGAAAGCTAAGGCACTGTTTGGTGAACAAGATGAGGAGAGATTGCAGGTATTCAAAGGAGACACAAGGAAGGAGGGTGATTTGGATCCATCCTTATTTGAGGGAGTCACTCATGTGATTTGCTGCACTGGAACAACGGCTTTTCCTTCAAGGCGGTGGGATGATGAAAATACACCAGAAAGAGTTGATTGGGTGGGTGTGAAGAATCTAATATCCGCGTTGCCTTCGTCAGTGAAGAGAGTTATTCTTGTGTCATCGATAGGTGTGACAAAGTGTAATGAATTGCCATGGAACATTATGAACCTATTTGGTGTCTTGAAGTATAAGAAGATGGGCGAGGAATTTCTTCAGAATTCTGGCTTTCCATATACGATAATTAGACCTGGAAGGTTGACAGATGGACCATACACATCTTATGATCTCAATACTTTACTCAAAGCAACAGCCGGCCAACGACGAGCAGTACTTATAGGTCAAGGAGATAAACTAGTGGGAGAGGCCAGTAGAATCGTTGTGGCTGAAGCCTGTATACAGGCACTAGATTTAGAAGTCACTGAAAATCAAATATACGAAGTTAGCTCTGTCGagGGTGAAGGTCCTGGAAATGATACTCAGAAGTGGCGAGAATTATTTGAGGCCGCGCTATCTAGCTAA 978 0.3875 MASTSAASTFLQFHSLSSSQLFITKLSNNNHISLSFSSSKQTSNYKRFYAKAVSTDSQKPLTQDKQNTPSSSSSKLVLVLGASGGVGQLVTASLLQRNIKSRLILRDLEKAKALFGEQDEERLQVFKGDTRKEGDLDPSLFEGVTHVICCTGTTAFPSRRWDDENTPERVDWVGVKNLISALPSSVKRVILVSSIGVTKCNELPWNIMNLFGVLKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLEVTENQIYEVSSVEGEGPGNDTQKWRELFEAALSS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00214 325 CDD SDR_a5 77 302 - -
Tsu08g00214 325 Pfam NAD(P)H-binding 81 289 IPR016040 -
Tsu08g00214 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 70 302 IPR036291 -
Tsu08g00214 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 62 321 - -
Tsu08g00214 325 Gene3D - 73 324 - -
Tsu08g00214 325 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 62 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00214 Tsu-Chr8 1929894 1933641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00214 79 195 Miscellaneous Gene Families AT4G27250 34.109 3.54e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00214 - - gmx:100804322 463.381