Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00213 atgaCTTCAAATTCCAGCACTAGTCATAGCTACCCCATCAAAACAGTGGTCATATTGGTTCAAGAGAACCGTTCCTTTGACCACATGTTGGGTTGGATGAAGTCCCTCAACTCGGAAATCGATGGTGTTACCGGTTCGGAGTCAAATCCAATTTCCACAAGTGATTCCAACTCGAGTCGGGTTCAATTCGGCGATCAGTCAATCTATGTTGACCCAGACCCTGGTCATTCAATCCAAGACATTTATGAGCAAATTTTTGGAGAACCATGGAGCGAAGCCTCGGCAGCAAAGAAGTTGCCACCGAAGATGGAGGGCTTCGCTCAAAATGCAGCTAGACAAGAGAAACCAAAAGACACAACGGTGCCAATGACAGAGGCAGTTATGAATGGGTTCAAACCGGATTCAGTGCCAATTTACAAGGAGTTAGTTAAAGAGTTTGCGGTTTGTGACCGTTGGTTTGCTTCGGTTCCCGCATCAACCCAACCGAACCGGCTCTATGTGCATTCCGCCACGTCACATGGGTTAAGTAGCAATGACACAAATAAGCTCATTGGGGGGTTACCTCAGAAAACCATATTTGATTCTTTGGACGAAAATGGATTCAATTTTGGGATCTATTTTCAACAACCACCTTCCACTCTTTTCTACAGGAGTCTTAGGAAGCTAAAATACATTGATAACTTTCATGAATATGGCTTAACATTCAAGAAGCATTGTGAAGAAGGAAAATTACCAAACTATGTGGTAATAGAACAAAGATTTTTCGACTTATTATCGATACCTGGGAATGACGATCATCCATCTCACGATGTTGGAGAAGGACAAAAATTTGTAAAAGAAGTGTATGAAGCACTAAGAGGTAGTCCACAATGGAATGAAATGTTGTTTGTGATTACATACGACGAACATGGAGGATTTTACGATCATGTACCAACGCCGGTAGACGGAGTTCCTAGTCCAGATGACATTGTTGGTCCTGAGCCTTTCAAGTTTAAGTTTGATAGGCTTGGTGTAAGGGTTCCAACCATCTTTATTTCTCCTTGGATTGAGCCAGGAAAAGTGTTGCATGAACCTTCTGGACCATTTCCAACATCACAATATGAGCATTCATCTATACCAGCAACTGTTAAGAAGATATTCAATCTCCctaattttttgacaaagagaGATGCATGGGCAGGAACATTTGAGGGGCTTTTAACTCTAACCAGACCAAGAACTGATTGTCCAGAGAAATTGCCCGAACCGATTAAACTAAGAGAGGCTGCTGCTAAAGAACAAGCCAAGTTGAGTGAATTTCAGGAAGAATTGGTACTAATGGCAGCTACTTTAAATGGTGATCATAGAAAGAGTATATATCCGGACAAGTTAATCGAGAACATGTGTGTTACGGACGCAGTTAAATATGTTGAGGATGCATTCAATACATTCTTGAATGAGTGTGAGAAAGCAAGACAAAATGGTGCTGATGGATCTGAAATTGTTGATTGTGCTGATACATGTAGTACACAACCAAATTCCAAAAGTTTCTTGCACAAGATGATGTCTTGTATAACCTGTGATCGATGA 1569 0.4085 MTSNSSTSHSYPIKTVVILVQENRSFDHMLGWMKSLNSEIDGVTGSESNPISTSDSNSSRVQFGDQSIYVDPDPGHSIQDIYEQIFGEPWSEASAAKKLPPKMEGFAQNAARQEKPKDTTVPMTEAVMNGFKPDSVPIYKELVKEFAVCDRWFASVPASTQPNRLYVHSATSHGLSSNDTNKLIGGLPQKTIFDSLDENGFNFGIYFQQPPSTLFYRSLRKLKYIDNFHEYGLTFKKHCEEGKLPNYVVIEQRFFDLLSIPGNDDHPSHDVGEGQKFVKEVYEALRGSPQWNEMLFVITYDEHGGFYDHVPTPVDGVPSPDDIVGPEPFKFKFDRLGVRVPTIFISPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPNFLTKRDAWAGTFEGLLTLTRPRTDCPEKLPEPIKLREAAAKEQAKLSEFQEELVLMAATLNGDHRKSIYPDKLIENMCVTDAVKYVEDAFNTFLNECEKARQNGADGSEIVDCADTCSTQPNSKSFLHKMMSCITCDR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00213 522 Pfam Phosphoesterase family 13 383 IPR007312 GO:0016788
Tsu08g00213 522 Gene3D Alkaline Phosphatase, subunit A 3 187 IPR017850 -
Tsu08g00213 522 Gene3D Alkaline Phosphatase, subunit A 246 429 IPR017850 -
Tsu08g00213 522 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 2 509 - -
Tsu08g00213 522 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 2 509 IPR007312 GO:0016788
Tsu08g00213 522 SUPERFAMILY Alkaline phosphatase-like 157 383 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00213 Tsu-Chr8 1925639 1927689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00213 8 518 Acyl Lipid Metabolism Gene Families AT3G03530 65.607 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00213 K01114 - gmx:100805391 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00213 08 1925639 1927689 Tsu08g00213 08 1925639 1927689 ECH