Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00212 ATGGCTAAACTCGACGAAGATCAGGTTGTGGTGGAACGTAAATTATCCGCGAGAGTTTTGACATTGAACAGACCGAAGCAATTGAATGCCCTCTCTTATTATATGGTATCAAAGCTACTGGAAATATTTCATGACGACGAGGGAAATTCTGATGTTAAAGTGGTTGTTGTTAAGGGAAATGGAAGGGCATTTTGTGCTGGTGGTGATGTTGCAGCCGTCGTTCGTGATGCGAGAGGAGGTGATTGGAGATTTGGTGCaatattttttgataatgaatATAAATTGAACTATTTGATGGCAACATATAGTAAGCCTCAGGTTTCAATTCTTAATGGAATTGTCATGGGAGGCGGCGCTGGTGCTTCTATGCATGGAAGATTTCGTGTCGTTACAGAGAATACAGTCTTTGCAATGCCAGAAACAGCTTTAGGATTATTTCCCGATGTAGGCGCCTCATATTTCTTGTCTAGACTAGCTGGATTTTTTGGAGAATATGTTGGTCTCACAGGTGCTAGGTTGGATGCTGCAGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCTTCATCGAAATTATCGTTATTGGAAGAATCATTATGCAAGGTGGAAACTAGTGATCCAGTTGTAGTATCTGCAATTATTGACAAGTACTCAGAGCAGCCTTCCCTTAAAGCAGATAGTGTTTATCACAGGATGGACATAATCAATAGGTGTTTCTCTAGGAAAACAGTGGAAGAAATATTATATTCTCTTGAGACCGAAGCTACGAGTAAGGCAAATAGTTGGATTTCTTCAACTCTTGAAACCTTGAAGAAAGCATCTCCAACAAGTCTTAAAGTCTTCCTTCGATTGATTAGAGAAGGAAGGCTCCTTGGTGTTGGTCAATGCCTTGTTCTTGAGTACAGAATTGTTTGCCATATCCTACGAGGACACCACAGCAAGGATTTTTACGAGGGTTGTAGAGCTATACTGATAGATAAAGACAGGAACCCAAAGTGGGAGCCTTCCAAATTAGAGCTTGTGAGTGATAGCGATGTCGGCCGTTACTTTTCTAAGGTTGATGCAGAAGGATGGAAAGATTTGGAGTTTCCCAAAAGGTTCAACAACTTGCCTGCACATGCTATTTCAAAGCTTTAA 1140 0.407 MAKLDEDQVVVERKLSARVLTLNRPKQLNALSYYMVSKLLEIFHDDEGNSDVKVVVVKGNGRAFCAGGDVAAVVRDARGGDWRFGAIFFDNEYKLNYLMATYSKPQVSILNGIVMGGGAGASMHGRFRVVTENTVFAMPETALGLFPDVGASYFLSRLAGFFGEYVGLTGARLDAAEMLACGLATHFVPSSKLSLLEESLCKVETSDPVVVSAIIDKYSEQPSLKADSVYHRMDIINRCFSRKTVEEILYSLETEATSKANSWISSTLETLKKASPTSLKVFLRLIREGRLLGVGQCLVLEYRIVCHILRGHHSKDFYEGCRAILIDKDRNPKWEPSKLELVSDSDVGRYFSKVDAEGWKDLEFPKRFNNLPAHAISKL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00212 379 Pfam Enoyl-CoA hydratase/isomerase 18 351 IPR045004 -
Tsu08g00212 379 Gene3D - 4 369 - -
Tsu08g00212 379 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 5 379 - -
Tsu08g00212 379 SUPERFAMILY ClpP/crotonase 7 337 IPR029045 -
Tsu08g00212 379 CDD crotonase-like 9 193 - -
Tsu08g00212 379 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 5 379 IPR032259 GO:0003860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00212 Tsu-Chr8 1917350 1924929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00212 6 379 Miscellaneous Gene Families AT5G65940 67.380 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00212 K05605 - gmx:100170729 617.846