Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00210 ATGGAAGTGGTGGGATTAGGTCTTGATGAGAACGATTACTTATCATGCTGTGGAAGCACCAAATGGGCCAAGGAAATGGCTTCAAATTCTCCTTTCCCTAACTACTACCGCGCCCTTTCTGTTTCCAAAGACATTTGGCTCAACAAACTTGATATCAATAGTTGGCTTCAAGCTTTCTCTGCTCATCCTTCCATTGGTCAAACTCATGCTCCTTCTCATGCATCTCAAACCAGTGCTCAGTGGAGTAGGGGAGAGCAATCAACTGCTTTAGCAACTGCTACTGATTCTAAATTACAGGAACTAGCTGAATGGAATGCTCGGTATGTGCAAaagtttggttttgtgtttctCATATTCGCATCTGGGATAAGTACTGATGCTATACTTGCTGAAATAAAGAAACGCTATACAAACAGACCAATTGTTGAATTGGAGAATGCATCTCAGGAGCAAATGAAAATTACAGAAATTCGCCTTGCAAAGCTCTTCacaagtaaaaaaaacatatctTCTACAACTGATAAGAATTCCAATGTTGCTAGAAATGCAGAAGAAGTTCGTGTAAACGTTATTGGAGGTCATGTGACTGCTGCTCCGGACACTTTATCAGCAACGTCCATCCGAAGTTCATCTAGAACCCGCCCACCCATTACCACTCACGTGTTGGATGTTTCGCGGGGTTATCCAGCTTCCGGTATTGAGGTGATTTTAGAGATATGGAAGGGCAACCAAGCTCGTCCGCCATTTGGGACTACAGATGGTGGCGGTTGGATTTTTAAAGGGTCTTCGGCGACAGATTCAGACGGTCGTAGTGGTCAACTGATTGACATAGTTGATGACGCTGAGCCAGGGATATACAGGTTAAGTTTCAACACCGGAAAGTACAATCCAAACGGTTTCTTTCCTTATGTATCTGTTGTGTTTGAAATTTTCGAGTCACAAAAAAAGGAACATTTTCATGTTCCTTTGTTGCTTTCGCCATTTTCATTTAGCACTTACCGTGGAAGctaa 1011 0.4125 MEVVGLGLDENDYLSCCGSTKWAKEMASNSPFPNYYRALSVSKDIWLNKLDINSWLQAFSAHPSIGQTHAPSHASQTSAQWSRGEQSTALATATDSKLQELAEWNARYVQKFGFVFLIFASGISTDAILAEIKKRYTNRPIVELENASQEQMKITEIRLAKLFTSKKNISSTTDKNSNVARNAEEVRVNVIGGHVTAAPDTLSATSIRSSSRTRPPITTHVLDVSRGYPASGIEVILEIWKGNQARPPFGTTDGGGWIFKGSSATDSDGRSGQLIDIVDDAEPGIYRLSFNTGKYNPNGFFPYVSVVFEIFESQKKEHFHVPLLLSPFSFSTYRGS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00210 336 SUPERFAMILY Transthyretin (synonym: prealbumin) 209 336 IPR036817 -
Tsu08g00210 336 Pfam HIUase/Transthyretin family 217 335 IPR023416 -
Tsu08g00210 336 Gene3D - 9 166 IPR036778 -
Tsu08g00210 336 ProSitePatterns Transthyretin signature 1. 220 235 IPR023418 -
Tsu08g00210 336 ProSitePatterns Transthyretin signature 2. 319 331 IPR023419 -
Tsu08g00210 336 SUPERFAMILY UraD-Like 14 164 IPR036778 -
Tsu08g00210 336 PRINTS Transthyretin signature 216 236 IPR000895 -
Tsu08g00210 336 PRINTS Transthyretin signature 314 336 IPR000895 -
Tsu08g00210 336 PANTHER 5-HYDROXYISOURATE HYDROLASE 9 336 - -
Tsu08g00210 336 MobiDBLite consensus disorder prediction 67 86 - -
Tsu08g00210 336 TIGRFAM hdxy_isourate: hydroxyisourate hydrolase 216 336 IPR014306 GO:0006144|GO:0033971
Tsu08g00210 336 CDD TLP_HIUase 215 336 IPR014306 GO:0006144|GO:0033971
Tsu08g00210 336 Pfam OHCU decarboxylase 15 160 IPR018020 -
Tsu08g00210 336 PANTHER URICASE AND TRANSTHYRETIN-RELATED 9 336 IPR023416 -
Tsu08g00210 336 Gene3D Transthyretin/hydroxyisourate hydrolase domain 206 334 IPR036817 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00210 K13484 - gmx:100788368 487.263