Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00185 ATGGTTCTTGTTCTAAGTAGCTGGATTTCCACTGTTGATGTTTTTGTTAGTTTCTTGTTGCTGATTAGTTGTGGAATAACTTATGGGACTGAAACTGATATCTtgtgtttgaaaaatataaagaattCGATCCAAGACCCGAATAATTATTTGACATCTTCGTGGAATTTCAACAATAATACTGAAGGGTATATTTGTAGATTTAATGGTGTTGAATGTTGGCATCCTGATGAgaatagagtcttgaatctcaaATTGTCAAATATGGGACTTAAGGGTCAGTTTCCTCGTGGCATTGTTAATTGTTCAAGCTTAACTGGATTAGATCTTTCCGTCAACGATCTCTCTGGAACAATTCCAGGTGAGCTTCTAAAATATGTGACGTCGCTTGATCTTTCTTCGAATGCATTTTTCGGAGAGATACCTGATAGTCTTGCAAATTGTACTTATTTGAATAGTCTTAAGCTTAATCAAAACAACCTCACCGGTCAAATTCCTCCACGATTAGGCACTCTCCCACGTATTAAGACGTTTGATGTATCTGACAATCTTTTGACTGCGCCAATTCCAAACTTCACCGATGGTCATGTTGCTACAAATTATGCAAATAATCCAGGTCTTTGTGGAGGTTCATTGGTGGTTTGCAAGGCCAATGCTTCCTCGAAGAGTAACACTACATTTGAGTCCAATAAAGTTTGA 699 0.3577 MVLVLSSWISTVDVFVSFLLLISCGITYGTETDILCLKNIKNSIQDPNNYLTSSWNFNNNTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIVNCSSLTGLDLSVNDLSGTIPGELLKYVTSLDLSSNAFFGEIPDSLANCTYLNSLKLNQNNLTGQIPPRLGTLPRIKTFDVSDNLLTAPIPNFTDGHVATNYANNPGLCGGSLVVCKANASSKSNTTFESNKV 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00185 232 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Tsu08g00185 232 PANTHER LRR RECEPTOR-LIKE KINASE 6 225 - -
Tsu08g00185 232 Gene3D Ribonuclease Inhibitor 27 94 IPR032675 -
Tsu08g00185 232 Gene3D Ribonuclease Inhibitor 95 224 IPR032675 -
Tsu08g00185 232 PANTHER RECEPTOR-LIKE PROTEIN 55 6 225 - -
Tsu08g00185 232 SUPERFAMILY L domain-like 31 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00185 Tsu-Chr8 1686799 1687497 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00185 15 212 Receptor kinase-like Gene Family AT3G28450 46.305 3.75e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00185 - - gmx:100305365 320.472