Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00184 ATGGAAGACAAGGATTCAGTTGCTAAAATGATGGACTCTACTTCTTCGAAGATACAACAGCTGCAAAAGGCTTTTGCTGAACTTGAAAGTTACCGAGCTGTTACTCTtaacatgaaatggaaagatcTAGAGGAACATTTTCAGGGGCTAGAGAAATCCTTGAAGAGGCGCTTTCGTGAACTGGAAGACCaagaaaaattgtttgaaatCAAAACAAGGGAATCTCGTGAAATGTTGGAGAAACAGGAAGCAGCTGTTTTTGCTAAGGAGCAAGCCTCGCTGCAGAGGCTTCAAAAGAAAAGAGATGCTTCTGTATTCAGCATCGTAAATGCTCGAAAAAAGCACAGGAAGGTTTCATCAAAGGGTTTTGTCTTTAATGAGAGTCCAGGGACACCAGTTGTAGAAGAGAAACCTTTAGATGCTGCATCCACTGGGGCTGAATGCAACATAGAAAACATCCAACTTTCTCCTGAAAATGTGGACTTGATGTCTTATCCAGAGTTGGTAAAGCTATGCAAAGAGATGGATGCTGCTGGACTTCACAAATTTATATCTGACAACCGCAAGAACCTTGCTGCTGTAAGGGAGGAAATACCACTTGCGTTAAGAGCTGCTCCTAATGCTGCCTCTCTAGTTTTAGATTCGTTGGAAGGATTTTATTGCACAGAAGCGTCAAGTCAGGATATAAAGAAAGATGCTAACTTGTTGGGTCTTCGCCGAACCAGTATCATGTTGCTGGAATGTCTAAGTGAGCTCCTGACCAACTTGGGTTCTGTTTCTAATGTGATTTCCGAAGATATCAAGAATAGGGCAAAGGCAGTTGCTGAAGAATGGAAACCGAGATTGGATGCTCTTGATATTGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCATTTTTGCAACTTCTAGCCAGTTTTGGAATTGCCTCTGATTTTAACGAGGAGGAGTTATCCAGGCTAATTCCAATGGTGTCTAGGCGTCGCCAAACTGCTGATTTGTGCCGGTGCCTTGGGTTGTCGGAGAAGATGCCTGGTGTGATTGAAGTTTTGGTAAACAATGGGCGGCAAATTGACGCTGTTAACTTGGCTTTTGCATTTGATCTTACAGAACAGTTTTCACCTATTCCTTTGCTAAAGTCTTACCTGAATGATGCTAAGAAAACTTCTTCTCCAGTCAAGAGTGTTAACTTTTCTCCCACTGCACAGACCGAGGTTAATGAAAGAGAGCTGTTTGCCCTCAAGGCCATACTGAAGTGCATTGAAGAACATAAACTTGACGAGCAGTATCCTATGGATCCACTTCAGAAACGAGTGATCCAACTTGAGAAGGCCAAGACTGACAAGAAAAGGGAAACTGAAGCAACAAAACCTCAACCCAAGAGACCCTGTGCTAATGGCGTGGGATATGGTCCTCGTGTCACTAACAATCCTTCTGACAGAACTTCATATGTTAGAGTTGTTGACAGGTACCCACAATATATGTATGACAGACCTTACTTGTACCCTGGACCAACTGAAAATCACTGCACCCCATTCCTGGGTTCTGCAAACTATAACGTCTCTCCTAATCCTGGAACTTACTTTGGAAATGGCTACCAATATCAAGCTACATATCTTCACTAA 1626 0.4213 MEDKDSVAKMMDSTSSKIQQLQKAFAELESYRAVTLNMKWKDLEEHFQGLEKSLKRRFRELEDQEKLFEIKTRESREMLEKQEAAVFAKEQASLQRLQKKRDASVFSIVNARKKHRKVSSKGFVFNESPGTPVVEEKPLDAASTGAECNIENIQLSPENVDLMSYPELVKLCKEMDAAGLHKFISDNRKNLAAVREEIPLALRAAPNAASLVLDSLEGFYCTEASSQDIKKDANLLGLRRTSIMLLECLSELLTNLGSVSNVISEDIKNRAKAVAEEWKPRLDALDIDASNGNSLEAHAFLQLLASFGIASDFNEEELSRLIPMVSRRRQTADLCRCLGLSEKMPGVIEVLVNNGRQIDAVNLAFAFDLTEQFSPIPLLKSYLNDAKKTSSPVKSVNFSPTAQTEVNERELFALKAILKCIEEHKLDEQYPMDPLQKRVIQLEKAKTDKKRETEATKPQPKRPCANGVGYGPRVTNNPSDRTSYVRVVDRYPQYMYDRPYLYPGPTENHCTPFLGSANYNVSPNPGTYFGNGYQYQATYLH 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00184 541 Pfam Frigida-like protein 164 453 IPR012474 -
Tsu08g00184 541 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 4 541 - -
Tsu08g00184 541 MobiDBLite consensus disorder prediction 445 480 - -
Tsu08g00184 541 PANTHER FRIGIDA-LIKE PROTEIN 4 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00184 Tsu-Chr8 1675265 1680042 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00184 - - gmx:100806993 865.529