Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00182 ATGTACATGATTGAATACTTCATGCATTCCTTCTGCTTGACTGCCAACTCTAAAATCAGGAATGTGATACCTTTCACCCTTGTATGCCGAATCACACTCTCGAACGCGTGCTATAAAAACAAAGCAGTGGAGTTCAGAAGTTTCATTCACCAATTAGGGGGTATGGACCTCAAAGAAGCTATTAAGGACAAAATACCTTGGGATGGAACTCTCTCTTTAAATGATTTTTCCCTTTCTGCTTCTACATTTTCTGACAAGTGGAAAATGTTCAATCCTTCATTTCCTCCATGGTTATGGATCCCTTGTCCAAAATACCATTTGAGTTCTTCTCATAAGGTTGAAGGTTACTTATCACTTGAGAATGTGTGCCTTGTCAAATCAAGTGAGGAAGAAGAGAACCACAAAAGTCTGTCATGGAAAGAAGAGAGTAATATCTCACTGACAGAAGAGCCCTTTGATCATGCAACTTTAGTTTGCCCAGAGTACGAAGCAAACCACTATGATTTTCACATTGTCTACAGTCCTTCATATAGAGTTCCGGTGTTGTATTTCCGTTCATACTATAGTGATGGACAGCCTTTGTCGCTCAGCGAAATCGAAAAGGATCTTCCTGGTTATTCTGCAGAGTTGCTACTAGAATCCAAATGGACATTTATAACTCAAGAGGAACATCCATATTTGAATAGACCATGGTACAAGTTACATCCATGTGGGACGAGGGACTGGATGAAACTGCTTTTAAGCGATACATATACATCTTCGAACAAAAACTTCATTGAACAATATCTGGTGTCTTGGTTTTCGGTTGTCGGTCAAGTGGTCGGCCTTAAAACCTCTTTGGAAATGTTGAATATTGTAGgttaa 864 0.3935 MYMIEYFMHSFCLTANSKIRNVIPFTLVCRITLSNACYKNKAVEFRSFIHQLGGMDLKEAIKDKIPWDGTLSLNDFSLSASTFSDKWKMFNPSFPPWLWIPCPKYHLSSSHKVEGYLSLENVCLVKSSEEEENHKSLSWKEESNISLTEEPFDHATLVCPEYEANHYDFHIVYSPSYRVPVLYFRSYYSDGQPLSLSEIEKDLPGYSAELLLESKWTFITQEEHPYLNRPWYKLHPCGTRDWMKLLLSDTYTSSNKNFIEQYLVSWFSVVGQVVGLKTSLEMLNIVG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00182 287 Pfam Autophagocytosis associated protein, active-site domain 83 277 IPR007135 GO:0019787
Tsu08g00182 287 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 64 282 IPR007135 GO:0019787
Tsu08g00182 287 Gene3D - 108 278 - -
Tsu08g00182 287 PANTHER AUTOPHAGY-RELATED 10, ISOFORM B 64 282 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00182 K17888 - gmx:100808589 363.999