Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00181 ATGGCGTTACAGTTTGTGAAACAGAACCAGTTACGAGGTTTACAGAGGGAGACAaccttaaatttattttctgtCTTACGAAATCTTAAGCTCCCAGGAACAGTGAGATGGGTCAGTGGTCAAGTACCAGTTAAAGGTTCCTTTAGAAGCTATGCTACTGCAAAATCAGAAAGGATTATACCAATCAAGAAGAAAAAAAGGCTGGATGAAGTATGCCTTGAAAAATATCAGCAATATAGTAGATCCATCATTCAGTCATGGATTTTGCAAGGAAAAGTATATGTGAATGGAAAGGTGATTAATAAAGCTGGTACCCCTGTGTCTGAAAAATCTGTAGTGGAGATCATTGCTGAAGTTCCAAAATATGTATGTAGAGCTGGACATAAGTTGGAAGGTGCCATTGAACAGCTCGGTGTTGATGTGGCTGGTAAAGTGGCTCTTGATTCTGGACTATCAACTGGAGGGTTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGGGTTGACGTAGGTTATGGACAGGTAGCAGAAAAAATACGAAGAGATGAACGTGTATCTATTATAGAGCGAACAAATTTAAGATATCTCAAAGAACTCCCCCAAAATGTTGATTTGGTGACACTAGACctctcattcatctctattcTTACGGTCATGCCTGCTGTGGTAAATGTCATGAAAGAAGATGCTGCCTTAGTAACTTTGGTTAAACCACAATTTGAAGCTCAGAGATCTCAAGTAGGAAAGGGAGGGATAGTGAAAGATCCTGTTGTTCATCAAGAGGTACTTGAGAAGATTACAAAGGGAGTAGAGAGTTTTGGTTTCTGCAGCAAAGGTTGGATTGAGTCTCCTCTCAAAGGTGCTGAGGGTAATACAGAATTCCTTGTTCACTTTAGCAGAATCCCTAACAAAACTGCTTAA 930 0.386 MALQFVKQNQLRGLQRETTLNLFSVLRNLKLPGTVRWVSGQVPVKGSFRSYATAKSERIIPIKKKKRLDEVCLEKYQQYSRSIIQSWILQGKVYVNGKVINKAGTPVSEKSVVEIIAEVPKYVCRAGHKLEGAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVAEKIRRDERVSIIERTNLRYLKELPQNVDLVTLDLSFISILTVMPAVVNVMKEDAALVTLVKPQFEAQRSQVGKGGIVKDPVVHQEVLEKITKGVESFGFCSKGWIESPLKGAEGNTEFLVHFSRIPNKTA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00181 309 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 303 IPR029063 -
Tsu08g00181 309 Gene3D - 55 122 IPR036986 GO:0003723
Tsu08g00181 309 SUPERFAMILY Alpha-L RNA-binding motif 65 118 - -
Tsu08g00181 309 Pfam FtsJ-like methyltransferase 122 301 IPR002877 GO:0008168|GO:0032259
Tsu08g00181 309 CDD AdoMet_MTases 147 226 - -
Tsu08g00181 309 Pfam S4 domain 67 112 IPR002942 GO:0003723
Tsu08g00181 309 Gene3D Vaccinia Virus protein VP39 125 309 IPR029063 -
Tsu08g00181 309 ProSiteProfiles S4 RNA-binding domain profile. 66 126 - -
Tsu08g00181 309 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 67 296 IPR004538 GO:0003723
Tsu08g00181 309 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 62 307 - -
Tsu08g00181 309 SMART s4_6 66 131 IPR002942 GO:0003723
Tsu08g00181 309 CDD S4 66 115 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00181 K06442 - gmx:100781303 496.508