Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00180 ATGACCATTCAAGCTTTTCatgcttcttcttcttgttaCTTCAATTCCCACTTTCATTCTTGTTCCAAAAAGAATCTACCTTCAAGGAAATATCTGAAGTTGAAGTGTACTACTTCTTCAAATGGCAACAATGGAAAAAGAGACAAAGATGaatatcttctggatgctcctGTTTCTGTTGGTGATGGTTTTTCTTTCAGTGGAGGAAAATATTCAGATGGACCTAACCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTAAAGCCTATTCAACTCCCGGAACTGGTGAAAAGGCGAAAGATCCAATTTTCGGGCTAACAATGGGCACTAGCTCACAAGCTACCGGAGATCGTTTCAGATGGTTTTGTGTCGAAAAAGGAAATGCTGATAATCCTTCAGTCATATTAATCCATGGTTTCCCTTCACAGGCATATTCGTATCGCAAAGTTCTTCCAGTACTCTCCAAGGACTATCATGCCATAACATTTGATTGGCTAGGATTTGGATTTTCTGATAAGCCTCAACCCAAATATGGGTTTGACTACACCCTAGATGAATATGTGTCATCATTGGAGTCACTTATCGATGAACTTGCTGTTACTAAAGTCTCACTTGTTGTCCAGGGATATTTTTCACCAGTTGTAGTTAAGTATGCCAGCATTCACCCGGAGAAGATTAACAACTTAATTCTCATTAATCCACCTGTACGTTTATGTTTGAGTTGTGTTATTTTGACCGATAAATTTGATATTAGTTTAGATGGTTAA 771 0.3632 MTIQAFHASSSCYFNSHFHSCSKKNLPSRKYLKLKCTTSSNGNNGKRDKDEYLLDAPVSVGDGFSFSGGKYSDGPNPSDEWFKQGKMVKAYSTPGTGEKAKDPIFGLTMGTSSQATGDRFRWFCVEKGNADNPSVILIHGFPSQAYSYRKVLPVLSKDYHAITFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFSPVVVKYASIHPEKINNLILINPPVRLCLSCVILTDKFDISLDG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00180 256 SUPERFAMILY alpha/beta-Hydrolases 114 239 IPR029058 -
Tsu08g00180 256 PANTHER HYDROLASE-LIKE 43 237 - -
Tsu08g00180 256 PANTHER EPOXIDE HYDROLASE 43 237 - -
Tsu08g00180 256 Pfam alpha/beta hydrolase fold 133 237 IPR000073 -
Tsu08g00180 256 Gene3D alpha/beta hydrolase 108 242 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00180 Tsu-Chr8 1656243 1660267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00180 125 238 Acyl Lipid Metabolism Gene Families AT3G05600 31.624 2.82e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00180 - - gmx:100809126 378.252