Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00169 ATGTCGCAACCgcaacagcagcagcaacatcaacaacaacaactcaaCAGTAACATTCCAGTAAGCGAAATTTTCTGGACTCTCGTCGACAAAGCCGAcaaaaaattctccaaaatcAGAGACATACCCTATTACCAACGCTCAAGACACGATACATATTTCTCTAAGGTTTTCAAAGTCTACACACAATTATGGAAATTCCAACAAGAAAATCGTCAAAAACTAATCGAAGCAGGTTTAAAACGATGGGAAATTGGCGAAATTGCTTCGCGAATCGGTCAACTTTATTTCGGACAATACATGAGAACTTCTGATTTTAATTACTTATCAGAATCATATATTTTCTATGAAGCTATTTTCACTCGTGATTATTTTAAAGATGGTTTGTTTCAAGATGTTAATATTGCGAATAAACAATTGAGGTTTTTAGCGAGGTTTTTGACGGTTTGTTTGCTTTTGAATCGGAGGGAAGTGTTGCCGCAATTGGTTAATCAGCTTAAGGTTTTGGTTGATGAGTGTAAGAGAGTTTTTGTGGATAGTGATTTTAGAGAATGGAAGGTTGTTGTTTTGGAAATTGGGAGGTTTTTGAAAGCTGATACTAGTTTTATGAATGTTAGACCAGTGAGGTATAGTTTGGTTTTGGATTCTCATCCTGATACTTTGCCACATGTTCCTGTTGCTATTGCGAAGCGGAATTTGAAATTGCGAGATGCTGTGTTGAGTAGCTTTCATCATAATGAGGTTAAGTTTTCAGAGCTCACTATTGACACTTTTAGGATGCTTCAATGTTTGGAGTGGGAACCTAGTGGCTCATTTTACCAATCTGGTGGTTCAAAACTTAGTCATAATGGGGCAACTGGGAGTGGTCGTATCAGTTACTTACAAGATATTGCTGATCCTACGTTACCGGCAAACCCACGGAAAGCTATATTATACCGTCCTTCACTGACACATTTTGTAGCTGTTCTTGCCACAATTTGTGAGGAGCTTCCTCCGGATGGTATTCTCCTTGTATATTTATCAGCTTCAGGAGCAGGAGCAGGAGCAGGATCTTTTGGTGCTGGGCATAATGAATCTGGTTGTATAAACTTTGGTTCCCGTGGAGATAGAGGATCAAACTGCATATATCCATCTGACTTTCTACCGTTTACTAGAAGACCACTTCTTTTAGTTATTGATAATGAAAACAGCAAATCTTTTAAGGTCATAAAAGAGGCAGAAAAAGGAGAGTCGGTGGCAATGCTCCTTTCTCCAAATCGGCTGCCTCCTATTGTGTCTGATTGCTCACATTCTTCAAATGGGAGCCTATTCACCATGTTTCTTACAGCTCCATTGCAAGCTTTCTGTCTGCTGCTAGGGTTTTCAGGCACTGATATTGATTTGGACTTGTACAATAAAGCTGAAATACTGCTCTCGTCATCATTAAATAACTGGGGATTGGCGTTGGCATCATCAGACACACTTGATCCAGTTTGGGGACAGGTTTTAGGCGATCCCTTCATAAGGAGACTTCTTTTGAGATTCATATTTTGCCAGACAGTGCTGACCTTGTATGCACCAGTTTACAATAAAAGCGACTTCCTTCCAACATGTGTTCCTTCCCTTACAACGCCTGTCCTACCCCCAAGCCACTCGTATCAAAGTGTAATTCAGCAACTAGCCAGCATTTTTGGTGCAACTAAGCACTTCATCTTTTCTGAGAATGTTTCTCCTGAAAATATACCTTCAAACGTGGATCAGGTGTGA 1746 0.3877 MSQPQQQQQHQQQQLNSNIPVSEIFWTLVDKADKKFSKIRDIPYYQRSRHDTYFSKVFKVYTQLWKFQQENRQKLIEAGLKRWEIGEIASRIGQLYFGQYMRTSDFNYLSESYIFYEAIFTRDYFKDGLFQDVNIANKQLRFLARFLTVCLLLNRREVLPQLVNQLKVLVDECKRVFVDSDFREWKVVVLEIGRFLKADTSFMNVRPVRYSLVLDSHPDTLPHVPVAIAKRNLKLRDAVLSSFHHNEVKFSELTIDTFRMLQCLEWEPSGSFYQSGGSKLSHNGATGSGRISYLQDIADPTLPANPRKAILYRPSLTHFVAVLATICEELPPDGILLVYLSASGAGAGAGSFGAGHNESGCINFGSRGDRGSNCIYPSDFLPFTRRPLLLVIDNENSKSFKVIKEAEKGESVAMLLSPNRLPPIVSDCSHSSNGSLFTMFLTAPLQAFCLLLGFSGTDIDLDLYNKAEILLSSSLNNWGLALASSDTLDPVWGQVLGDPFIRRLLLRFIFCQTVLTLYAPVYNKSDFLPTCVPSLTTPVLPPSHSYQSVIQQLASIFGATKHFIFSENVSPENIPSNVDQV 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00169 581 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 8 351 - -
Tsu08g00169 581 PANTHER TRANSDUCER, PUTATIVE (DUF3550/UPF0682)-RELATED 356 573 - -
Tsu08g00169 581 PANTHER PROTEIN SCAI 8 351 - -
Tsu08g00169 581 PANTHER PROTEIN SCAI 356 573 - -
Tsu08g00169 581 Pfam Protein SCAI 360 519 IPR022709 GO:0003714|GO:0006351
Tsu08g00169 581 Pfam Protein SCAI 28 345 IPR022709 GO:0003714|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00169 Tsu-Chr8 1558878 1563194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00169 - - gmx:100810202 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00169 08 1558878 1563194 Tsu08g00169 08 1558878 1563194 ECH