Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00166 ATGGGTCAAATCTTAAACAAGTTTCAAGGTGAAGAGTGGAGGAAAACGCAAGTTAGGAAGATAACAGATCGAGTTTTTCAGAAAGTAAGGAATCAACTTAAAACGGAAtatttgagttttgaagatCTGTATATTGCTGTTTTACTTGTTTACAATGATATCAACAAGATTATCCCTGGTCCCCATTTCGATCCTCCGTCAAAAGAAACAGTCAGACAAATCATGCAGGAATGTGATATGAACTTGGATGGAGCAATTGATCATGAAGAATTTGTTGATTTCATCCAGAAAATCACAGCTGATACATTCACTGTCGTTAGTCAAAAACTTATCATCACTCTAGTTGTAGCGCCGTCTGTTGCAATGGCGACAAAAAGAGCCACTGAAGGTGTCCCTGGTGTTGGAAAAGTGGTGCAAAAGCTACCTAATGCAATTTATGCATCCCTTGTTACTCTTGCAGTTGTGTGGTTCCAAAAGATGCAAGATGAATCTACAATCTGA 501 0.3752 MGQILNKFQGEEWRKTQVRKITDRVFQKVRNQLKTEYLSFEDLYIAVLLVYNDINKIIPGPHFDPPSKETVRQIMQECDMNLDGAIDHEEFVDFIQKITADTFTVVSQKLIITLVVAPSVAMATKRATEGVPGVGKVVQKLPNAIYASLVTLAVVWFQKMQDESTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00166 166 PANTHER S100 CALCIUM-BINDING PROTEIN 4 163 - -
Tsu08g00166 166 PANTHER CALCIUM-BINDING EF HAND PROTEIN 4 163 - -
Tsu08g00166 166 SUPERFAMILY EF-hand 24 98 IPR011992 -
Tsu08g00166 166 Gene3D - 9 111 - -
Tsu08g00166 166 ProSiteProfiles EF-hand calcium-binding domain profile. 66 101 IPR002048 GO:0005509
Tsu08g00166 166 SMART efh_1 70 98 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00166 1 156 EF-hand Containing Proteins AT1G64850 69.231 5.27e-80 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00166 - - gmx:100526914 254.603