Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00159 ATGGCTCAACAAGTGAGGAACAAACAAGTGATTTTGAGGGACTATGTGTCTGGTTTTCCTAAAGAATCAGACATGAACATTGTTGACAGTACCATTACTCTTAAGCTTCCACAAGGTTCCAATGAGTTGCTgctaaaaaaattgtacttGTCATGTGATCCATACATGCGGATTCTGATGACCAAGGACACTACTGCAGGACTTGGTGCTCACACCCCTGGTTCTCCATTGATAGGATATGGTGTGTCTAAAGTTCTGGAATCTGGACACCAAGATTATACGAAAGGTGATTTAGTTTGGGGTATTACTAAATGGGAAGAGTATAGCTTGGTCCCTGCAACTGGAATGTGCAAAATTGAACACACTGATGTCCCACTTTCCTACTATACTGGAATTCTAGCTATGCCAGGATTGACTGCTTATGCTGGTTTCTTTGAAGTAGGCACACCGAAAAAAGGAGAGAATGTTTTTGTTTCAGCTGCCTCTGGTGCATTTGGTCAACTTGTCGGACAATTCGCTAAGTTAACCGGTTGTTATGTTGTTGGAAGTGCTGGAAGTAAAGAGAAGGTAGATCTATTGAAGAATAAATTTGGATACGATGAAGCCATTAACTACAAAGAAGAGCAAGACCTTGATGCAGCATTGAAAAGGTACTTTCAAGAAGGCATTGACATTTACTTTGAGAATGTTGGAGGCAAGACACTTGATGCTGTCCTCCCAAATATGAGAGTCCATGGTCGCATACATGTGTGTGGAATGATTTCACAGTATAATCTTAGTCAACCAGAAGGTGTAACAAATTTGGCACATATCATATATAAGCGGATTCGTATGCAAGGTTTTATTACACCTGATTACTATCACTTTTATACAAAATTCTTGGAATTTATTCTGCCTCTAATAAGAGAAGGAAAGATTGTGTATGTGGAAGACATAGCCGAGGGACTAGAGAATGGCCCTGCAGCATTAGTTGGTCTCTTTAGTGGTCGCAATGTTGGTAAACAAGTGGTTTTTGTTGCTCATGAGTGA 1029 0.3975 MAQQVRNKQVILRDYVSGFPKESDMNIVDSTITLKLPQGSNELLLKKLYLSCDPYMRILMTKDTTAGLGAHTPGSPLIGYGVSKVLESGHQDYTKGDLVWGITKWEEYSLVPATGMCKIEHTDVPLSYYTGILAMPGLTAYAGFFEVGTPKKGENVFVSAASGAFGQLVGQFAKLTGCYVVGSAGSKEKVDLLKNKFGYDEAINYKEEQDLDAALKRYFQEGIDIYFENVGGKTLDAVLPNMRVHGRIHVCGMISQYNLSQPEGVTNLAHIIYKRIRMQGFITPDYYHFYTKFLEFILPLIREGKIVYVEDIAEGLENGPAALVGLFSGRNVGKQVVFVAHE 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00159 342 Pfam Zinc-binding dehydrogenase 166 297 IPR013149 -
Tsu08g00159 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 302 IPR036291 -
Tsu08g00159 342 CDD double_bond_reductase_like 5 339 - -
Tsu08g00159 342 Pfam N-terminal domain of oxidoreductase 8 118 IPR041694 -
Tsu08g00159 342 Gene3D - 132 308 - -
Tsu08g00159 342 SUPERFAMILY GroES-like 4 169 IPR011032 -
Tsu08g00159 342 SMART PKS_ER_names_mod 43 337 IPR020843 GO:0016491
Tsu08g00159 342 PANTHER NADP-DEPENDENT ALKENAL DOUBLE BOND REDUCTASE 4 342 - -
Tsu08g00159 342 Gene3D - 9 337 - -
Tsu08g00159 342 PANTHER PROSTAGLANDIN REDUCTASE 4 342 IPR045010 GO:0016628
Tsu08g00159 342 SUPERFAMILY GroES-like 285 337 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00159 Tsu-Chr8 1498395 1500550 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00159 K19825 - mtr:MTR_8g009840 580.096