Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00157 ATGGAGGTGGAATTAGAACCTCGCGTGAAACCTCTTCAATTCAAGGTCAAAGCTATGTCCAGAGAATCTCCGTCGCAAAAAGCTCTTAACGTTCTCGACTCCGACCTCCGTTCTCACTGGTCCACCGCTACTAACACTAAGGAATGGATTCTACTCCAACTCAATGAGCCTTGCTTGTTGTCGCATATACGGATTTATAACAAGTCTGTGCTCGAATGGGAAATTGCAGTGGGCTTGCGGTACAAGCCAGAGACATTTCAAAAAGTTCGCCCACGTTGCGAAGCACCCAGACGTGACATGATCTACCCTACAAATTACACTCCGTGTCAATATGTGAGAATATCTTGTTTGCGTGGAAATCCTATcgctattttttttgttcagCTAATAGGAGTTTCTGTGGCTGGTCTCGAAGCTGAATTTCAACCAGTTGTTAATTACTTGCTACCACACATTCTATCTCATAAACAGGATCCTCATGATATGCATCTCCAGTTGCTGCAAGACTTGACAAATCGGTTGCTAGTATTTCTTCCACAACTTGAGACAGACCTTGCAAGCTTTCCAGATAATCCTGAATCTAACCTACGGTTTCTTGCCATGCTAGCGGGTCCTTATTATCCTATTCTTCATGTGGCAAATGCAAGGACAACTTCAAAGCATCCAGGCAATATCACTGACTCCGAAGTCTATAGAACTAATCAACTGTCACCAGCCCTAACTGTTTCCTCTAACTTTGAGCCAAGAAGATCACGAAGTTCCTCATCTTTCAATTTGTCTGCATATCGTTCCATGGTTTTACGgccaaatacaatttttatgttgCTGAGGAAGGCTTACAAAGATTCTGATCTGGGCTCTGTTTGTAGGATGGCATCTAGAATCATGCAGAAACTCATTGATCCTGATCCTGAGCAAGATGTATCATACCCTCAAAATGAACTTATTGCCCCTTTGGAGGAGAAATCAAAATTGGAACTTCCTAGTCCTTGCACTTCAGTTGATTACTCAAACCTGTTTGGTGAGGAGTTCAAAATGCAAGATGAGCACTGGGATTGTAGCTATCTTAATGTACTAGATATTGGGGCAGTGGAAGAAGGGATCTTACATGTTCTTTATTCCTGTGCAGCTCAGCCTGTTCTTTGCAGCAAGATGGCTGAGAGAATTTCAGAATTTTGGGCTGTTCTGCCGCTTGTACAAGCTCTGCTGCCAGCCTTACGCCCATGGTTGAGCAATTCTTTTGATGTTGTGGATGACTCGTTTTCTCAGTGGAATCAACCTATTGTACAACAAGCCTTATCTCAGATTGTTGCTACAGCAACATCAGCTACCTATCGCTCCCTTCTTCATGCTTGTGCTGGTTATCTATCTTCGTATTCACCATCTCACGCTAGGGCTGCTTGTGTGCTGATTGATTTGTGCTCTGGTGTACTAGCACCATGGATTACTCAAGTGATTGCAAAGGTTGATCTTGCTCTGGAACTTTTGGAGGATCTTTTGGGCATAATCCAGGATGCTCACAATTCACTCATTCGTGCTCGTATTGCCTTGAAGTATATTGTGCTAGCTCTTTCTGGGCATGTGGATGACATATTGGGAAAATATAAGGAAGTTAAACACAGAATCCTCTTTCTTGTGGAGATGCTGGAGCCTTTTCTTGATCCGGCTATTGCTGTATCAAAAAGCAAAATAGCTTTTGGAGATCTATCTTCTTCATTTCCAGAACAGCAAGAGCACAATTGCATGATTTCTCTAAATATCATTCGTGCTGCAGTACAAAAGCCAGCTGTTCTACCTTCTTTGGAATCAGAATGGAGACATGGGTCGGTGGCTCCTAGTGTGCTTCTCTCAATACTGGAACCACACATGTTACTGCCGCCTGATGTTGATCTTTGCAAATCTGTTTTAAGACCAACTGAACATGAAACTGCATCTGTTTCACCTCTTTCCTCTGGGGTTAATGGTGGAAGTTCCTTTTCGAAGTTCAATAGTCAAGATGACTCTGATGGCAAAACGGAGGTACCAGAAACAGCAGGAAGATCTGATTTTGTTGAAGACCGTAATCTACTTTTTGCTCCACCAGAGTTGCAGGGCATTTCATTGAGAAACAGTTCTAATGTTCCTAACCATAATAGCTCTGTTTCTGACGCTGGGGATATGAGACTGGAATCGAAACATGTGGTTGATAAACATTCCACCCATCGTTTTCTTTCTAATGTTGTCATAGATTCCGGCCTTGGTTTTGAATACTTCAACCTGCAGGCAGATTACTTTCAACTTTTAAACTACCATGATTGTGAGCTTCGTGCTTCTGAGTTTAGACGTTTGGCTTTAGATTTGCATTCTCAGAATGACGTCACTGTTGAAACCCATGATGCCGCAATTGATGCTTTTCTGTTGGCAGCAGAATGTCATGTAAACCCTTATTTTATGTTGACTATTGGAGCCTCTTCAAAACTTACAGACCTTTTGAACATAAAGGAAGGTAAAACTGTGCACACTCATACTAATGTGAATGCGAAAGGGGCTTTTGGAAAAAACAAACCTAACCTAGAAACAATAGCACAtatagagagaaaaagagataaaCTTGTTTTTCACATTCTGCTTGAGGCTGCAGAGTTGGATAGGAAGTATCATTTAAGAGTATCTGATGGTGAAGGTGGTCCTTATTGTGGTGAAGGTTTTGATGAACAGGTTATCAAGATGTCTTCTCATGATGAGCAACATGCAGATGCTTTAACCTTAGTTCGACAAAATCAAGCTCTACTCTGTAACTTTTTGATTCAACGTTTGCAGAGAGACCAAATTTCAATGCATGAAATTCTCCTGCAAAGTCTTGTGTATTTTCTGCACACTGGCACTAAACTATTTTGCCCTCCAGAAAGTGTGATtgatatcattttaaaatatgctGAAGACTTAAACAAGATGCTGGCATCTTTTCATCATGAGCAGAAGGAAGGTAATTTGCATTTGGCACAAGAAAGAACACACGGGGTAGAACGGCGTTGGTTACTTTTACAACAATTGGTTATTGCTTCAAGTAATGGAGATGAAGAGGAAAATTTTGGAACTAGCATCCAAAATAGTTATCTCTGTGGAAATTTAATTCCCCCTTCAGCATGGATGCAGAGAATTTCTCATTTTTCTGGTTCTGTGTACCCTTTGGTTCGATTTCTGGGGTGGATGGCAGTATCTCGTAATGCCAAACAATATATGAAAGACCAAAGTTTCCTTGCATCTGATCTGTCTCAGCTGACATATTTACTTTCCATTTTTGCTGATGATCTTGCTGTTGTTGATAATGTGATCAATAAAAAGTATGAAGAGGTTAAAATTGAAGATTCACGGGTTGAACATAGCTCCACAacaaagaaagaatttgagcgaGGTAACCAATATCATGAAGAACAATCTTTTTCTGCAGTCTACCCCGAACTTTGGAAGTTCTTTCCAAAAATGAAAGGGAAATTTGAATCATTTGGAGAATCCATTTTAGAGGCTGTTGGTTTGCAGCTCAGATCTGTATCTTCCACTCTCGTGCCTGATGTTTTGTGTTGGTTTTCTGAACTGTGTTCATGGCCATTTTCTTTCACTTCTTCAATTGGCAGTGATAATTTGAAAGGTTATAATGCGAAGAATGCCAGAACAATAATCCTTTATATACTTGAAGCTATTATAGCTGAGCACATGGAAGCCATGGTTCCTGAGACACCTAAATTGGTGCATGTGCTTGTGTCACTTTCAAGTTCTTCATACTGTGATGTGCCATTTCTTGAATCTGTGTTGGGTTTGTTGAAGCCAATTATTTCTTATTCATTGTCCAAGGTCTCTCATGATGAAAGGTTATTGGAAGGTGATTCCTGTCTGAACTTCGAGGAATTATGCTTTAATGTTCTTCTCagtaaaatcaaacataaaaatGATATCAAACTTCCTGAAGATAAAGAGTACAATGTAGCACtgggtatttttattttggcttCAATTTTCCCTGACCTATCTATTCAATATAGAAGGGACTTTTTGCAGTCTTTATTAAGTTTGGTGAACTTTGCTGATTCAGAGCCAACAACTTCTCTCTATGATTATCTCAGTGCATTTCAATGTGTTATGGATAATTGCAAACTACTATTAGTTAATGCATTAACAGCAAGTGGTGTTATTCCTCTTCAGTTGCCCCCTTTTCCCCGTGTGAGTGTTGGTGGGCTTTCTGATGATAACTTACCAAATCCTTGGTTTCTTAGTGATATATGTCACCATTCATTTGAGAATGATGTGCATAATGTAGAACATAACAATTCTACTGCTGATGATGATCACAGTCTTTTACCTTCTGAAGATTTAGAAGGGTTTTCTAAAGACATAGAGGTTCTCATATCTGAGCTTACTCCAGCTATTGAGCGCTGTTGGAATCTCCATCATCAGATAAGCAGAAAACTAACAATATCATCAGCAGAGTGTTTTGTATTCTCAAAATGTTTGACATCAATTTCTCAAAAATTTCATAAATgtgaagatgatgatcaagATTCTTCATTGACCAAATCATCTGACCTGTTCTCTCTTCATTGGAGAGTTGGTGTTCAAGGCCTCTCTGAATTGATCACTGTCCTCCAAGAAAGCAGTTGCTGGGATGTTTCTTGTTTGATGCTTGATTGTCTACTTGGTATACCCTATAGCTTTTCCCTGGATAATGTGGTAGGCATTATATGTTCGGCCATAAAGAAAGTTGCTTGCAATGCACCTAAAATCTCTTGGCGTTTGCGGAGTGATAAATGGCTGTCTTATTTGACTGCCAGAGGCATCTATAACACTCAAGAAAGTGAGATTCCTCTCACAGATCTATTTTGTACATTCCTGGGACATGCAGAACCTGAACAACGTGTCATAGCAGTTAAACATCTGGGAAGACTTCTTGGCCAGTCTATGAATGGTGAAAGAGAACTGATAAATTCTAGGATTTGCACAGACTTTGTTTCAAATAAGTTAGTTTTATCTATTCCCGATTATGTATTATCGCAGCTGGTTTCAAATACTTGGGATGAGGTTGTTGTGCTGGCATCATCTGATACATCATCACAAATAAGGGTTCATGCAATGGCTCTTCTTTCAAATTATATACCATTTGCCGAGCGCCATCATATACAATCTCTTCTTGTGGCAGCTGATAGCATTTGTTGTTTGCGTAATGCACAACCTTCACATGATGGTTCTGTCCTTCAACTTTCATTAGCACTTATTGCTTATGCCTGTCTTTGCTCACCACCCGAAGATATTTCTTTGATTCCTCAAACTGTATGGGAAAATGTTGAAACTTTAGCATCAACAAAATATGATGGCAAGCTTGGAGACCTTGAGAAGAGGACTTGTCAAGTTCTATGTAGATTGAAAGATGGAGATGAGACCAAAGAGGCCCTGAAAGAAGTactttcttcaaattcttcaaagCAGTATGATCAAGATTTTGCTAGCACACGTGAATCTGTGCTCCAGgtccttggcaacttaaAGGCGGTTCAGTCATACTTTGATGTATTCTCTACAAAAATTAACCAAGATGATATGGAGCTAGAGGAGGCTGAGTTGGAACTAGACATTATACAGAAGGAACGTGCATTACCTGGACAAGTGGAGGATTCCAAAGATCGGAATCAAATTACTAGTTTACTGTCCAGCAGAAAGGATGTTCCAAGGCTTCAGCAGATCAGAGAGTGCATTCGTACCCTAGAAAAGTCCAAACTTAAAGAAGATATCCTAGCCCGTAGGCAAAAGAAACTACTTATAAGACATGACCGTCAAAAATATTTGGAAGAAGCAGCTTTACGGGAAGCAGAAATTCTGCAAGAACTTGATAGggaGAGAGTGGCTGAAATGGAGAAAGAGATGGACAGACAAAAGTTATTAGAAATAGAGCGTGCTAAAACAAGGGAACTGCGTCACAATCTTGATATGGAGAAAGAGAGACAAACACAGAGGGAACTTCAGCGGGAAATAGAGCAAGCAGAATCAGGAATTCGGCCATCTCGGCGTGACTTTCCTTCCACTCACAATAGTCGACCCAGGGATAGATTTCGGGAAAGAGACAATGGGAGATCTGGTAATGAAGGGAGCACTAGAGTTGGCCCCGGAAGCTTGCAGTCTGAAATCCCGTCCACCAATTCATCATTGGCAGCCTCACCAACTATAGTTCTTTCTGGCTCACGGACATTTTCAGGCCAGATGCCAACTATCTTACAGTCACGTGACCGACAGGATGACAGTGGCAGCATATATGAAGAGAATGTTGATGGAAGCAAGGATTCGGGTGATACCGGCAGCATTGGAGATCCAGAATTGGCATCAGCATTTGATGGTCAGTCTGGTGGGTATGGGTCCCAAAGACATAGTTCAAGGGGAAGCAAATCAAGGCAACTAGGTGAACGTAGAGACAGAGAAAACAGGCGTGAAGGGAAATGGGAAAGGAAACATTAA 6477 0.3968 MEVELEPRVKPLQFKVKAMSRESPSQKALNVLDSDLRSHWSTATNTKEWILLQLNEPCLLSHIRIYNKSVLEWEIAVGLRYKPETFQKVRPRCEAPRRDMIYPTNYTPCQYVRISCLRGNPIAIFFVQLIGVSVAGLEAEFQPVVNYLLPHILSHKQDPHDMHLQLLQDLTNRLLVFLPQLETDLASFPDNPESNLRFLAMLAGPYYPILHVANARTTSKHPGNITDSEVYRTNQLSPALTVSSNFEPRRSRSSSSFNLSAYRSMVLRPNTIFMLLRKAYKDSDLGSVCRMASRIMQKLIDPDPEQDVSYPQNELIAPLEEKSKLELPSPCTSVDYSNLFGEEFKMQDEHWDCSYLNVLDIGAVEEGILHVLYSCAAQPVLCSKMAERISEFWAVLPLVQALLPALRPWLSNSFDVVDDSFSQWNQPIVQQALSQIVATATSATYRSLLHACAGYLSSYSPSHARAACVLIDLCSGVLAPWITQVIAKVDLALELLEDLLGIIQDAHNSLIRARIALKYIVLALSGHVDDILGKYKEVKHRILFLVEMLEPFLDPAIAVSKSKIAFGDLSSSFPEQQEHNCMISLNIIRAAVQKPAVLPSLESEWRHGSVAPSVLLSILEPHMLLPPDVDLCKSVLRPTEHETASVSPLSSGVNGGSSFSKFNSQDDSDGKTEVPETAGRSDFVEDRNLLFAPPELQGISLRNSSNVPNHNSSVSDAGDMRLESKHVVDKHSTHRFLSNVVIDSGLGFEYFNLQADYFQLLNYHDCELRASEFRRLALDLHSQNDVTVETHDAAIDAFLLAAECHVNPYFMLTIGASSKLTDLLNIKEGKTVHTHTNVNAKGAFGKNKPNLETIAHIERKRDKLVFHILLEAAELDRKYHLRVSDGEGGPYCGEGFDEQVIKMSSHDEQHADALTLVRQNQALLCNFLIQRLQRDQISMHEILLQSLVYFLHTGTKLFCPPESVIDIILKYAEDLNKMLASFHHEQKEGNLHLAQERTHGVERRWLLLQQLVIASSNGDEEENFGTSIQNSYLCGNLIPPSAWMQRISHFSGSVYPLVRFLGWMAVSRNAKQYMKDQSFLASDLSQLTYLLSIFADDLAVVDNVINKKYEEVKIEDSRVEHSSTTKKEFERGNQYHEEQSFSAVYPELWKFFPKMKGKFESFGESILEAVGLQLRSVSSTLVPDVLCWFSELCSWPFSFTSSIGSDNLKGYNAKNARTIILYILEAIIAEHMEAMVPETPKLVHVLVSLSSSSYCDVPFLESVLGLLKPIISYSLSKVSHDERLLEGDSCLNFEELCFNVLLSKIKHKNDIKLPEDKEYNVALGIFILASIFPDLSIQYRRDFLQSLLSLVNFADSEPTTSLYDYLSAFQCVMDNCKLLLVNALTASGVIPLQLPPFPRVSVGGLSDDNLPNPWFLSDICHHSFENDVHNVEHNNSTADDDHSLLPSEDLEGFSKDIEVLISELTPAIERCWNLHHQISRKLTISSAECFVFSKCLTSISQKFHKCEDDDQDSSLTKSSDLFSLHWRVGVQGLSELITVLQESSCWDVSCLMLDCLLGIPYSFSLDNVVGIICSAIKKVACNAPKISWRLRSDKWLSYLTARGIYNTQESEIPLTDLFCTFLGHAEPEQRVIAVKHLGRLLGQSMNGERELINSRICTDFVSNKLVLSIPDYVLSQLVSNTWDEVVVLASSDTSSQIRVHAMALLSNYIPFAERHHIQSLLVAADSICCLRNAQPSHDGSVLQLSLALIAYACLCSPPEDISLIPQTVWENVETLASTKYDGKLGDLEKRTCQVLCRLKDGDETKEALKEVLSSNSSKQYDQDFASTRESVLQVLGNLKAVQSYFDVFSTKINQDDMELEEAELELDIIQKERALPGQVEDSKDRNQITSLLSSRKDVPRLQQIRECIRTLEKSKLKEDILARRQKKLLIRHDRQKYLEEAALREAEILQELDRERVAEMEKEMDRQKLLEIERAKTRELRHNLDMEKERQTQRELQREIEQAESGIRPSRRDFPSTHNSRPRDRFRERDNGRSGNEGSTRVGPGSLQSEIPSTNSSLAASPTIVLSGSRTFSGQMPTILQSRDRQDDSGSIYEENVDGSKDSGDTGSIGDPELASAFDGQSGGYGSQRHSSRGSKSRQLGERRDRENRREGKWERKH 2158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 2014 2035 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 2135 2158 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 2036 2086 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 643 665 - -
Tsu08g00157 2158 SUPERFAMILY ARM repeat 395 1363 IPR016024 -
Tsu08g00157 2158 Gene3D - 9 138 - -
Tsu08g00157 2158 Coils Coil 1986 2006 - -
Tsu08g00157 2158 Pfam XRCC1 N terminal domain 15 82 IPR002706 GO:0000012|GO:0003684|GO:0005634
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 1981 2158 - -
Tsu08g00157 2158 Coils Coil 1852 1872 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 1981 2008 - -
Tsu08g00157 2158 PANTHER GALACTOSE-BINDING DOMAIN-LIKE, ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 2158 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 643 679 - -
Tsu08g00157 2158 SUPERFAMILY Galactose-binding domain-like 11 134 IPR008979 -
Tsu08g00157 2158 Coils Coil 1943 1963 - -
Tsu08g00157 2158 MobiDBLite consensus disorder prediction 2087 2101 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00157 - - gmx:100786119 3498.37