Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00152 ATGTTACGGTTAAAACTACAGAGTCACAACAAGCTATATCACAATTGTTGTGTTCTTTCTGCACTCATGTTACCACAATCACTCTCACCCTTTCgtcctctttcttcttcttcattttcccAACAAGTAGTAACagaacaacagcaacaacaacaaaagccaCAACTACGAAGCTCACAACTTGTCTCATTGGAATATGCTGACCTCAACCTTTCTTACgatttgAATCTGGGTCATGGCAGAATCAGGCAACATGTCAATCCTTTCAGTCCTTCTTTCTCTACTCCCGCACCAGTACCAGACTGGAACCAGGTCTTTGCAGACCCTGCATTGCCGCTCATGGTGGATATTGGATGTGGCAGCGGCAGGTTTCTTATGTGGCTTGCAAAAAGAACACCTAAAGTGAGAAATTATTTGGGATTGGAAATACGGCAAAAGATGGTCAAGCGTGCTGAGGTATGGCTAAAAGATTTGGCTCTGGATAACATACATTTCTTGTTTGCAAATGCTCCTATTTCTTTCAAGCAGTTGGTAGAATCATATCCTGGACCCTTGCAGTTAGTTTCAATTTTGTGTCCAGACCCTCATTTCAagaaaaaacatcataaaagaAGAGTTTTGCAGAAGCCTTTGGTTGGTGCTATTGTAGATAATTTATCTCCTGGAGGACAGGTGTTTGTACAATCCGATGTGCTCGAAGTGGCACTTGACATGAAAGACCAGCTTGATGAAGTTGATGCACTTAGTCACATAGATGCTTTGAACTCTGATATATTGTGTGATAGTGAAGGATGGTTATTAAGCAACCCTATGGGGATTAGGACTGAGAGAGAGATTCATGCAGAATTCGAAGGAGCGAAAATCTATCGAAGGTTGTACGAGAAGAAGCAGATGTGA 897 0.3846 MLRLKLQSHNKLYHNCCVLSALMLPQSLSPFRPLSSSSFSQQVVTEQQQQQQKPQLRSSQLVSLEYADLNLSYDLNLGHGRIRQHVNPFSPSFSTPAPVPDWNQVFADPALPLMVDIGCGSGRFLMWLAKRTPKVRNYLGLEIRQKMVKRAEVWLKDLALDNIHFLFANAPISFKQLVESYPGPLQLVSILCPDPHFKKKHHKRRVLQKPLVGAIVDNLSPGGQVFVQSDVLEVALDMKDQLDEVDALSHIDALNSDILCDSEGWLLSNPMGIRTEREIHAEFEGAKIYRRLYEKKQM 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00152 298 CDD AdoMet_MTases 115 228 - -
Tsu08g00152 298 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 44 296 IPR003358 GO:0006400|GO:0008176
Tsu08g00152 298 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 70 295 IPR003358 GO:0006400|GO:0008176
Tsu08g00152 298 Pfam Putative methyltransferase 112 289 IPR003358 GO:0006400|GO:0008176
Tsu08g00152 298 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 252 IPR029063 -
Tsu08g00152 298 Gene3D Vaccinia Virus protein VP39 83 298 IPR029063 -
Tsu08g00152 298 PANTHER TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE 44 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00152 Tsu-Chr8 1430056 1433478 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00152 K03439 - gmx:100788255 415.231