Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00151 ATGGCGGTCAGGCAAAGAGCAATAACAGCGCTTCCAAACCTCATACGCACTCTCCGCAACGAACAACCTTTCAAACTCAAACCTCCTCACAATCCCAATTATCCCAATCACAATTCCTTACCCTCTCTCCGACGCGCTTTCTCCTTATACGATCAGATCAATCTCATTGACAATGTCCCTGAAGATCAACTCCGTTTTCAAGGGTTTAATGATACTGGGTTTACTGTAAATGGAGTTGAATATGAAGGAAGTTTGCTTTGTGTTGGAAATTTGATCATGTCTTGGAAACCAAAGAAGTTTTCTGAGATCACTGCTGATAgCTTGTCACTCTTTCAAATTGTCCGCCCTATTCCAGAGATTCTAATTATCGGCTGTGGAAGGAACATTCAGCATGTTGATCCTGAACTAAGACGGTTTATTCGGTCTACTGGCATGAAGTTAGAAGCTGTCGACTCGAGAAACGCAGCATCAACTTACAACATATTGAATGAAGAAGGTCGTATTGTGGCTGCTGCGCTTCTTCCATATGGAGTTTCTTCATGA 543 0.4236 MAVRQRAITALPNLIRTLRNEQPFKLKPPHNPNYPNHNSLPSLRRAFSLYDQINLIDNVPEDQLRFQGFNDTGFTVNGVEYEGSLLCVGNLIMSWKPKKFSEITADSLSLFQIVRPIPEILIIGCGRNIQHVDPELRRFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00151 180 CDD Mth938_2P1-like 54 177 IPR034095 GO:0032981
Tsu08g00151 180 Pfam Protein of unknown function (DUF498/DUF598) 67 174 IPR007523 -
Tsu08g00151 180 PANTHER NUCLEAR PROTEIN E3-3 1 180 IPR007523 -
Tsu08g00151 180 PANTHER BNAC04G03830D PROTEIN 1 180 - -
Tsu08g00151 180 SUPERFAMILY MTH938-like 53 176 IPR036748 -
Tsu08g00151 180 Gene3D - 50 176 IPR036748 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00151 K09008 - gmx:100816956 301.212