Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00150 ATGTCCACTTTACTTCAATCCTctttcatttcttcttcattctctcCTTCCCCCCCTCGCATCTCCCTCCGTAACTCCGTCCTCaGATGTAACAACAATGTAGTTCAATCTGTGAATTTGGACAACGGAAAACCATATCGTTCAACTCAATCATCTTCAGTTAACGTTACAAGTTCCATACCGAGTTTTCTTCTCGCTCCAGATACTCGCATCCATGATCTTGTTAACAAAAATCGTCTTCGTATTTTCTCCGGTACCGCTAATCCTGCACTCGCTCAGGAAATCTCATGCTATATGGGCCTGGATCTGGGAAAAATTAAGATTAAACGTTTTGCTGATGGTGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTCGTACAGCCCACTTGTCCTCCTGCGAATGAGAATCTTATGGAGCTTCTCGTAATGATTGATGCCTGTAGGAGAGCTTCAGCCAAAACTATTACTGCGGTCATTCCATATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCCAATTTAATCACAGAAGCAGGAGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCCATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTATCTTGCCAGCAAGACTATTTGTTCGGATGATTTGGTAGTTGTCTCGCCAGATGTTGGTGGTGTAGCCAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGACATAATGTTGCGGAGGTGATGAATTTGATAGGTGATGTTAAGGGAAAGGTAGCAGTTATGGTAGATGACATGATTGATACTGCGGGGACCATCTCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACACGCTGTTTTCAGCCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCACTGGCAGAGAAGAACTATTTCCCCCAGTTAACAGTCTTATCAGTGGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCATGATGACTGCTCAGGTGGAATTGAACCTTTTTCCAGTTTGGGCATTGATTGA 1191 0.4307 MSTLLQSSFISSSFSPSPPRISLRNSVLRCNNNVVQSVNLDNGKPYRSTQSSSVNVTSSIPSFLLAPDTRIHDLVNKNRLRIFSGTANPALAQEISCYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKTITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTISKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPLAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPFSSLGID 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00150 396 Pfam Phosphoribosyl synthetase-associated domain 281 384 IPR005946 GO:0000287|GO:0004749|GO:0009165
Tsu08g00150 396 SMART Pribosyltran_N_2 80 196 - -
Tsu08g00150 396 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 80 390 IPR037515 GO:0004749
Tsu08g00150 396 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE-RELATED 50 395 - -
Tsu08g00150 396 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 50 395 IPR005946 GO:0000287|GO:0004749|GO:0009165
Tsu08g00150 396 Gene3D - 223 366 IPR029057 -
Tsu08g00150 396 CDD PRTases_typeI 239 351 IPR000836 -
Tsu08g00150 396 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 81 383 IPR005946 GO:0000287|GO:0004749|GO:0009165
Tsu08g00150 396 SUPERFAMILY PRTase-like 145 381 IPR029057 -
Tsu08g00150 396 Gene3D - 83 381 IPR029057 -
Tsu08g00150 396 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 80 196 IPR029099 -
Tsu08g00150 396 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 204 219 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00150 Tsu-Chr8 1418028 1423602 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00150 K00948 - gmx:100789585 652.129