Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00147 ATGGCTTCAAGACCTGGAATCCTCACTGATTGGCCATGGAAGCCTCTTGGAAGCTTTAAgTATGTAGTGCTAGCTCCATGGATCATTCATAGTACATATTCAGTGATGGTGAAAGATAAGAGTGAAAGGGATGTATCAACTTTTCTTATATTTCCATTTTTGTTATGGCGTGTTATTCATAATCAAATATGGATCAGTCTCTCTCGTTATCGAACTTCTAAAGGGAATAATAGAATTCTTGACAAAGGAATTGAATTTGATCAAGTTGATAGAGAAAAAGATTGGGATGACCAAATATTGTTCAATGGGTTACTATATTATTTGGCATGCTATACCTTGGAAGGGGCATCACGTCTTCCACTATGGAGAACTGATGGAGCTATAATTGCCACATTACTTCATATGGGACCAGTGGAGTTTCTTTACTATTGGTTACACAGAGcacttcatcatcattttctctaTTCTAGATACCATTCTCATCACCATTCTTCCATTGTCACTGAACCAATCACTTCTGTCATCCATCCATTTGCAGAACACATATCATATTTTCTTCTATTTGCAATACCCAAGTTGACCCTTGTCTTCACAAATAGAGCTTCTATTGTTGTCATGGTTGGATATGTCACTTACATTGATTTTATGAATAATTTGGGTCATTGCAACTTTGAGATTATTCCTAAGTGGCTCTTTGATATATTTCCACCTCTCAAGTATCTCATGTATACCCCCTCgtATCACTCTTTGCACCATACTCAATTTAGAACAAACTACTCACTTTTTATGCCACTTTATGACTACATTTATGGGACAATGGACAAAGCTTCAGATGAATTGCATGAATCAACATTAAAAAGAAAGGAAGAGACCCCAAATGTGGTCCATTTAACACATTTAACAACCCCTGAATCAATCTATCATCTTAGATTTGGATTTGCTTACTTGGCTTCTAAGCCATACACATCAAAATGGTACCTTTGGTTGATGTGGCCTGTCACTGCTTGGTCCATGTTACTCACATGGGTCTATGGTCGCACATTCATTGTTGAAAGAAATCGTTTTGATGACAAACTCAACCTCCAAACTTGGGTAATACCTAAGTACACTGTTCAGtacTTAATGCAATGGCAAAAAGTTCCTATCAACAAAATGATTGAGGAAGCAATACTTGATGCTGACAAAAAGGGAATAAAAGTGGTGAGCTTAGGTCTAATGAATCAAGGAGAAGAGCTTAACATGTATGGAGGATTATATGTTAGTAGGCATCCAAAGCTTAATGTTAAGGTTGTTGATGGTAGTAGTCTTGCTGTTGCTGCTGTTATTAATAGCATTCCAAAAGGAACAACTCAAGTATTACTTAGAGGAAAACTCACCAAAGTTGCTTATGCTATTGCTTTCACATTGTGCCAACAAGGAGTTCAGGTAGCTACAATGCATGATGATGATTATGTGAAGCTCAAAAAGTCTTTGATCAATAGCTCTGAAACAAATAATTTGATCTATACAAAAAGTTGCACTCAGATGATTTGGTTAGTGGGAGATGGATTGACTGAAGAAGAACAAATGAAGGCACCAAAAGGAACATTATTTATTCCATACTCACAATTCCCACCTAAGAAACATCGTAAGGACTGCTCATATCATTTCACACCAGCAATGCAAACTCCCACTTctattgaaaatgttcattcttgtgagGATTGGTTGCCAAGAAGGGTAATGAGTGCATGGCGTATTGCCGGAATAGTACACTCTTTAGAAGGATGGAATGAACATGAGTGTGGCTACAAAATGCAAAACATAGACAAAGTTTGGCATTCGGCTCTTAAACAAGGATTCCAACCTCTCACTACTCCACTTAAAAAAATTAGCTAA 1878 0.3621 MASRPGILTDWPWKPLGSFKYVVLAPWIIHSTYSVMVKDKSERDVSTFLIFPFLLWRVIHNQIWISLSRYRTSKGNNRILDKGIEFDQVDREKDWDDQILFNGLLYYLACYTLEGASRLPLWRTDGAIIATLLHMGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFAEHISYFLLFAIPKLTLVFTNRASIVVMVGYVTYIDFMNNLGHCNFEIIPKWLFDIFPPLKYLMYTPSYHSLHHTQFRTNYSLFMPLYDYIYGTMDKASDELHESTLKRKEETPNVVHLTHLTTPESIYHLRFGFAYLASKPYTSKWYLWLMWPVTAWSMLLTWVYGRTFIVERNRFDDKLNLQTWVIPKYTVQYLMQWQKVPINKMIEEAILDADKKGIKVVSLGLMNQGEELNMYGGLYVSRHPKLNVKVVDGSSLAVAAVINSIPKGTTQVLLRGKLTKVAYAIAFTLCQQGVQVATMHDDDYVKLKKSLINSSETNNLIYTKSCTQMIWLVGDGLTEEEQMKAPKGTLFIPYSQFPPKKHRKDCSYHFTPAMQTPTSIENVHSCEDWLPRRVMSAWRIAGIVHSLEGWNEHECGYKMQNIDKVWHSALKQGFQPLTTPLKKIS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00147 625 Pfam WAX2 C-terminal domain 452 616 IPR021940 -
Tsu08g00147 625 PANTHER STEROL DESATURASE 1 620 - -
Tsu08g00147 625 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 620 - -
Tsu08g00147 625 Pfam Fatty acid hydroxylase 134 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00147 Tsu-Chr8 1379703 1388927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00147 1 617 Lipid Metabolism Gene Families AT1G02190 58.054 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00147 K15404 - gmx:100818020 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00147 08 1379703 1388927 Tsu08g00147 08 1379703 1388927 ECH