Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00144 ATGGGAAGCGTTGAAACCTCAAACAAGGATACAAATGGAAGCCTGCTAAACAAAAATCCTACAATTGTGTTTGTGTTAGGTGGCCCTGGCAGTGGAAAGGGTACCCAATGTGCAAATGTTGTCGAACATTTTGGGTATACTCACCTCAGTGCTGGTGATCTTCTGAGAGCAGAAATCAAATCCGGCTCTGAAAATGGCACAATGATCCAGAATATgattaaagaaggaaaaattgTTCCCTCCGAGGTAACAATTAAGCTTCTGCAACGAGCAATTCAGGAAAGTGGCAATGATAAATTTCTAATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAACATTTGTCCTATATTTTGATTGCCCAGAGGAAGAGATGGAGAGACGACTTCTTAGTAGGAACCAGGGTAGAGAAGACGACAACATTGAAACAATAAGGAAGCGGTTCAAGGTTTTCTTGGAGTCTAGCCTCCCTGTGATTAATTATTATGATGCAAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGGCCTGTTGAAGAGGTATTTGAGTCTGCCAAAGCAGTTTTTGGTCCAAAAACTGAAAAGGCCTGA 621 0.4106 MGSVETSNKDTNGSLLNKNPTIVFVLGGPGSGKGTQCANVVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAIQESGNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPVEEVFESAKAVFGPKTEKA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00144 206 Gene3D - 8 199 IPR027417 -
Tsu08g00144 206 PANTHER NUCLEOTIDE KINASE 1 203 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 PANTHER UMP-CMP KINASE 1 203 - -
Tsu08g00144 206 PRINTS Adenylate kinase signature 24 37 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 PRINTS Adenylate kinase signature 52 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 PRINTS Adenylate kinase signature 100 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 PRINTS Adenylate kinase signature 164 178 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 CDD ADK 22 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Tsu08g00144 206 Pfam Adenylate kinase 25 177 - -
Tsu08g00144 206 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 22 199 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Tsu08g00144 206 ProSitePatterns Adenylate kinase signature. 100 111 IPR033690 -
Tsu08g00144 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 198 IPR027417 -
Tsu08g00144 206 Hamap UMP-CMP kinase [CMPK1]. 20 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Tsu08g00144 206 Hamap Adenylate kinase [adk]. 21 200 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00144 Tsu-Chr8 1341624 1347717 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00144 K13800 - gmx:100500111 384.415