Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00131 ATGGATGCAGATCCACAAAGAGATTTAAACTTGAAAAACTGCATCCGCAACAGTGATAGGGAAAAAATGGAAATCTCTAAGAACAATGAAATTTCAGTGACAACAAAACATGAGTATGATAGAGCAACTGAACTCAAAGCATTTGATGAAACAAAAGATGGGGTTAAAGGACTTGTTGATGCTTCTGTCACTAAAATCCCTCGCATATTCCATCATAAATTCGACAAGGAATCATCTTCAACTTCAACCAACATCACCAAACTTGATGTTCCTACTATTGACCTTGTTGATATTCATCAAGATCCCACAAGAAGGAAAATAGTTGTTGAGAATATTAGAGAAGCATCTGAGAAATGTGGTTTCTTTCAAATTGTTAATCATGGAATTGAAGTGAGTGTTTTGGATGAGATGAAGAATGGAGCGATTAGATTCTTTGAGCAAGATTCTGAGGTGAAAAGAGAAGTATACTCACGTGATCATTTGAGgccttttgtttataatagcaACTTTGATCTTTATAGTTCACCAGCTGCTTGTTGGAGGGATACCTTTTATTGTCTTATGGCTCCAAAATCTCCTAAACCAGAAGATTTACCATCAGTATGCAGAGATATAATGTTGGAATACAGAAAACAAGTTATGAATTTGGGAAATGTATTGTTTGAGTTATTATCAGAAGCACTTGGACTGAGTCCAAACTATTTAAATGACATGAAATGCAATGAGGGACTTGCAATTGTTTTCCATTACTATCCACCATGTCCTGAACCAGAATTGACTTTGGGAGGAACCAAACATACTGATATTGACTTTATCACTGTGCTTCTACAAGATCATATTGGTGGCCTCCAAGTTCTTCATGAAAATAATTGGATTGATGTATCACCTCTTCCAGGTGCTCTTGTAATAAACATTGGTGATCTTCTACAGcttataacaaATGACAAATTCAAGAGTGTTGAGCATAGAGTGGTGGCAAACCATGTAGGTCCAAGAGTATCAGTTGCAAGCTTTTTTAGAAGTTTTGAGCCATCAACAAGGCTTTTATGTCCTATAAAGGAATTAGTATCAGAAGTTAATCCTCCAATGTACAAGAAAACTACAGTTCGGGATTATTTTGAATTCTGCATGGCAAGAGGCTCTGATGGAACTCCTTCTTTGCCATATTTCAAGATTGGAAATTTCTGA 1188 0.3544 MDADPQRDLNLKNCIRNSDREKMEISKNNEISVTTKHEYDRATELKAFDETKDGVKGLVDASVTKIPRIFHHKFDKESSSTSTNITKLDVPTIDLVDIHQDPTRRKIVVENIREASEKCGFFQIVNHGIEVSVLDEMKNGAIRFFEQDSEVKREVYSRDHLRPFVYNSNFDLYSSPAACWRDTFYCLMAPKSPKPEDLPSVCRDIMLEYRKQVMNLGNVLFELLSEALGLSPNYLNDMKCNEGLAIVFHYYPPCPEPELTLGGTKHTDIDFITVLLQDHIGGLQVLHENNWIDVSPLPGALVINIGDLLQLITNDKFKSVEHRVVANHVGPRVSVASFFRSFEPSTRLLCPIKELVSEVNPPMYKKTTVRDYFEFCMARGSDGTPSLPYFKIGNF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00131 395 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-LIKE PROTEIN 23 394 - -
Tsu08g00131 395 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 240 341 IPR005123 -
Tsu08g00131 395 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 23 394 - -
Tsu08g00131 395 Pfam 2OG-Fe(II) oxygenase superfamily 246 340 IPR044861 -
Tsu08g00131 395 Pfam non-haem dioxygenase in morphine synthesis N-terminal 90 195 IPR026992 -
Tsu08g00131 395 Gene3D - 45 375 IPR027443 -
Tsu08g00131 395 SUPERFAMILY Clavaminate synthase-like 52 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00131 Tsu-Chr8 1184684 1187711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00131 38 392 Glycosyltransferase AT5G59530 55.432 1.76e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00131 - - mtr:MTR_8g009080 633.639