Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00124 ATGGAGAAAACAGTTCACATTGCAGTTGTTCCGGGTGTTGGATATAGCCATTTAGTCCCAATTCTTCAGTTTTCCAAGCAACTTGTTCAATTCCATCCAGACTTTCATGTCACATGCTTCATTCCCACACTTGGGTCTCCCTCAACTGCCTCAAAATCCATCCTTCAAAATCTTCCATCAAACATCAACTACACTTTTCTTCCACCTTTGAACCCCAATGATCTACCACAAGGGAGTACTGTCATAGAGAGCATTCACCTCACACTTGTTCACTCTCTCCCATATTTACATCATGCCTTGAACTCTTTATCTTTAAGGACTCCCATTGTGGCATTGGTGGTTGATCCTTTTTCTGTTAAAGCACTAGACTTTGCTAAGGAATTCAACATGTTGTCCTATATATACTTCCCAATGGCAGCTACGACGCTATGTTTGAGCTTCTATTTTCCTAAGTTGGATGAGGAAACATCATGTGAGTACAAAGATCTACCAGAGCCTGTCAAATTACCAGGTTGTGTACCAATCCATGGGAGAGATCTCTTTACCAATGTTCAAGATAGATCAAGTCAAGAGTACAAACAATTCCTCCAACTTCTTAAGTCTTTAAGTATTGCTGATGGTATTCTTGTTAATAGCTTCTTAGAAATGGAAAGAGTTTTATATGTGTCTTTTGGGAGTGGGGGTACACTTTCACCGGAACAAATTGTTGAGTTGGCTTTGGGTTTGGAGTTGAGTAATCATAAATTCATATGGGTAGTAAGAACACCAAGTAGTTCAACCGATGCTGCATATCTTTCAGCAGAAAATGATGTTGACCCTTTGCAATTTTTACCTTCTGGGTTTTTGGATAGAACCAAGGGCAAAGGTTTGATCATTCCATCATGGGCACCCCAGATTCAAATCCTTAGTCACAGCTCAGTTGGTGGGTTCTTGACTCATTGTGGTTGGAATTCAATCCTTGAGAGTGTAGTGCATGGTGTACCATTAATCACATGGCCTCTGTTTGCTGAGCAGAAAATGAATGCGGTTTTGCTGAGTGAAGGCTTGAAAGTGGGACTGAGGACAAGAGTTAATGAAAATGACATTGTGGAAAGGGTAGAGGTTGCTAAGGTGATCAAGTGTCttatggaaggggaagaagGTGGGAAATTGCGCAATAATATGAAGGAATTGAAAGAAGCTGCTAATAGTGCACACAAAGAAGATGGTTCTTCTACAAATACTATTTCTCAATTAGCACTCAAGTGGAGAAAGTTGGTGTTggaaaacttaaaaaatataaactcaaGAACATGGAAGCTGGATAACAAGCAGTAA 1317 0.3903 MEKTVHIAVVPGVGYSHLVPILQFSKQLVQFHPDFHVTCFIPTLGSPSTASKSILQNLPSNINYTFLPPLNPNDLPQGSTVIESIHLTLVHSLPYLHHALNSLSLRTPIVALVVDPFSVKALDFAKEFNMLSYIYFPMAATTLCLSFYFPKLDEETSCEYKDLPEPVKLPGCVPIHGRDLFTNVQDRSSQEYKQFLQLLKSLSIADGILVNSFLEMERVLYVSFGSGGTLSPEQIVELALGLELSNHKFIWVVRTPSSSTDAAYLSAENDVDPLQFLPSGFLDRTKGKGLIIPSWAPQIQILSHSSVGGFLTHCGWNSILESVVHGVPLITWPLFAEQKMNAVLLSEGLKVGLRTRVNENDIVERVEVAKVIKCLMEGEEGGKLRNNMKELKEAANSAHKEDGSSTNTISQLALKWRKLVLENLKNINSRTWKLDNKQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00124 438 Gene3D Glycogen Phosphorylase B; 6 218 - -
Tsu08g00124 438 CDD GT1_Gtf-like 6 395 IPR002213 GO:0008194
Tsu08g00124 438 PANTHER GLYCOSYLTRANSFERASE 1 218 - -
Tsu08g00124 438 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 219 420 - -
Tsu08g00124 438 Gene3D Glycogen Phosphorylase B; 219 400 - -
Tsu08g00124 438 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 218 - -
Tsu08g00124 438 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 219 346 IPR002213 GO:0008194
Tsu08g00124 438 ProSitePatterns UDP-glycosyltransferases signature. 295 338 IPR035595 -
Tsu08g00124 438 PANTHER GLYCOSYLTRANSFERASE 219 420 - -
Tsu08g00124 438 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00124 Tsu-Chr8 1159501 1161144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00124 4 417 Glycosyltransferase AT1G01420 44.946 1.90e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00124 K08237 - gmx:100778639 568.926