Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00113 ATGATGAAAAGGGAGATACACTTTGTGCACATTCTTTTCTTATCAATTCTTTCTCCATTGATTTGTGTGAATAGTGCAAACTTTGTACTGATTCATGGTGGAAGCCATGGTGCATGGTGTTGGTATAAGGTTGCAACTATGCTTAAATCAACTGGTCATAATGTTACAACTATTGAGTTAGCTGCTTCTGGTATCAATCCAATACAAGTTCAAGATattcattcaatttcaaaatattatgaaCCTTTGATGATATTTATGGAATCTCTTCCTCCAAAGGAAAAAGTGATTCTCGTTGGTCATAGTCTTGGTGGAGTGTCTACATCTGTTGCTATGGAAAAATTCCCACAAAAAATTTCAGTTGCAGTTTTTGTTACAGCTTATGTGCTTAGTCAAAATCTAACATACCCTGCTATTCTTCAAGAGCAAGCTAGAAGGAACGGTTCTTTAATGgacacaaattttttcttttttgatggACCCAACAAACCTGCCATTGCTAGACTCATTGGACCTGAATTCATGGCATCAAAGATGTATCAATTATCACCACCTGagGATTTGACCCTTGCATTGTCCTTAGTGAGACCTGTACCAATTTACAAAGATGTTGAATTATTGTTGAAGGAAACAACAGTTACCAATCATAGAAATGGAAAAGTACCTAAAATTTTTATCATAAGCAAAAGTGATAATTTAATAACCGAGGATTTACAAATGTGGATGATTAATAGAAGTGGTCCATTTGCTAATCTGATAGTGATTAAGGATTCTGATCACATGGTCATGTTCTCCAAACCAAGGAAACTTAGTTCTTCTCTTCTAAAGATTGCACAAAAATATTAA 846 0.3322 MMKREIHFVHILFLSILSPLICVNSANFVLIHGGSHGAWCWYKVATMLKSTGHNVTTIELAASGINPIQVQDIHSISKYYEPLMIFMESLPPKEKVILVGHSLGGVSTSVAMEKFPQKISVAVFVTAYVLSQNLTYPAILQEQARRNGSLMDTNFFFFDGPNKPAIARLIGPEFMASKMYQLSPPEDLTLALSLVRPVPIYKDVELLLKETTVTNHRNGKVPKIFIISKSDNLITEDLQMWMINRSGPFANLIVIKDSDHMVMFSKPRKLSSSLLKIAQKY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00113 281 PANTHER ALPHA/BETA FOLD HYDROLASE 11 281 - -
Tsu08g00113 281 Gene3D alpha/beta hydrolase 24 281 IPR029058 -
Tsu08g00113 281 PANTHER METHYLESTERASE FAMILY MEMBER 11 281 IPR045889 -
Tsu08g00113 281 Pfam Alpha/beta hydrolase family 28 270 IPR000073 -
Tsu08g00113 281 SUPERFAMILY alpha/beta-Hydrolases 28 279 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00113 Tsu-Chr8 1043987 1045631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00113 27 188 Miscellaneous Gene Families AT5G10300 40.123 1.06e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00113 - - aprc:113850828 353.214