Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00110 ATGAAAGATGGAAAATGCAGTGGAAGTGgtgtttattattataatatgaGTGGGAGATACGAAGGTGATTGGATGGATGGTAAATATGATGGATTTGGTGTTGAGATTTGGTCTAAAGGAAGTAGATATAAGGGTATGTATAGAGATGGTTTCAGAAATGGTTTTGGTGTTTATAGATTTTATACTGCTGATGTTTACGCTGGTCAGTGGTTCAATGGACAGTGTCATGGTTCTGGTATTCATACTTCTGATGATGGTGGTAGATTTGTTGGTCAGTTTAAATGGGGTGTTAAACATGGTCTTGGTCACTATCATTTTAGAAATGGAGATACATATGCCGGTGAATATTGTGCAGACAAGATGCATGGGTTTGGGGTATATTGTTTTGCAAATGGTCATCGTTATGAAGGAACCTGGCATGATGGGAAAAGACAAGGTCTTGGAATGTATACGTTTAGAAATGGAGAAACCCAATCCGGTCACTGGCAAAATGGAGTCCTCGATGTTCCAAGCACACAGAATGCCACATTTCCAGTTTCCCCTGTTGGTGTCAATCACTCCAGAGTACTTAATGTAGTGCAGGAAGCTAGGTTAGCAGCTGAGAAAGCCTATGATGTAGCAAAGGTAGATGAAAGAGTTAATAGAGCAGTATCAGCAGCTAATAGAGCAGCCAATGCAGCTAGAGCAGCTGCTGCCAAGGCTGTGCAAAATGAAATCCATCTTAACAATGAAAGCATCCAAATTCCCGTTTTGTGA 756 0.4008 MKDGKCSGSGVYYYNMSGRYEGDWMDGKYDGFGVEIWSKGSRYKGMYRDGFRNGFGVYRFYTADVYAGQWFNGQCHGSGIHTSDDGGRFVGQFKWGVKHGLGHYHFRNGDTYAGEYCADKMHGFGVYCFANGHRYEGTWHDGKRQGLGMYTFRNGETQSGHWQNGVLDVPSTQNATFPVSPVGVNHSRVLNVVQEARLAAEKAYDVAKVDERVNRAVSAANRAANAARAAAAKAVQNEIHLNNESIQIPVL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00110 251 Gene3D - 1 71 - -
Tsu08g00110 251 SMART morn 64 85 IPR003409 -
Tsu08g00110 251 SMART morn 18 39 IPR003409 -
Tsu08g00110 251 SMART morn 110 131 IPR003409 -
Tsu08g00110 251 SMART morn 41 62 IPR003409 -
Tsu08g00110 251 SMART morn 133 154 IPR003409 -
Tsu08g00110 251 SMART morn 87 108 IPR003409 -
Tsu08g00110 251 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 2 242 - -
Tsu08g00110 251 Gene3D - 118 182 - -
Tsu08g00110 251 Gene3D - 72 117 - -
Tsu08g00110 251 Pfam MORN repeat 43 61 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 135 156 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 89 111 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 66 88 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 20 42 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 2 16 IPR003409 -
Tsu08g00110 251 Pfam MORN repeat 112 134 IPR003409 -
Tsu08g00110 251 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 64 165 - -
Tsu08g00110 251 PANTHER - 2 242 - -
Tsu08g00110 251 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 2 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00110 Tsu-Chr8 1021923 1025391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00110 2 80 Acyl Lipid Metabolism Gene Families AT1G10900 39.241 1.22e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00110 - - gmx:100784010 424.091