Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00083 ATGTCTCATTTCCTTTTATTTGCGTTTGTTTTTGCTAGTCATGTCATTGGTGGATTGAATACAAAACTACCACCTCCATCATATGGAAGTACAATAACCATTCTCAGCATTGATGGAGGTGGTATTAAGGGAATTATTCCTACCGTAGTTCTTGAGCAATTGGAAAATGCTCTTAAGATTGTGTCAAAAGATGAAAAAGTGGTGTTGGCAGATTATTTTGATGTGATAGCTGGGACTAGCACAGGAGGACTCATTACTGCCATGCTTACTAGTCCTCACCCAAATGACACATCTCGTCCAGCATTTACTGCTCCAGATATCTTAAAATTCTACTTGGATTATGGCCCTTCTATATTCAATGAAACTTCTGCTATCGGTTGGAATATTGGTTCAAATCGTCCCAAGTATGACGGCAAGTTCTTATATGACATAGCATATGAGATATTGCCAGAAACACGATTACATGATACATTGACCAATGTTGTAATCCCAACTTACGACATCCATAATGTCCATCCAGTTATCTTCTCAAGTTTTAAGGTGAAGAAAGTTCCTACCTTAGATGCAAAAATGGCGGATATAGCCCTTGGGACTTCAGCTGCACCAACTTTACTACCACctatttactttaaaaatgaTGGTCGTGATTTCAATTTAGTTGATGGTGCTGTAGTTGCAAGTAATCCGGCATTGCTTGCGGTGAATGAAGTGATACAAcaattgaatgaaaaaaattcaaatttcattcCAAAGAAAGCAAACGAGCCTACAAAAATCCTATTGTTGTCATTAGGATGTGGAATAACTCCGTCGCCTATTAAGATTAATGCTAATATTGCAAAATACTTCAATGCAACAACATGGATACAACTTATAGCTAAAGGTCTTGGTGATGCTGTTGGAGACACaaatgaatatcaccttcaaACAGCCATTTCAACTCTCCGGTCTCCTAAAGATTACTACCTTCGAATCGAGGAGTATGACTTGGATGAATCCATTAGTGGTGCTGATAATACTACCAAAGAGAATATGGAAAATCTTGTAAAGGCAGGAGAGAACTTGCTGAAACAACCTGTTAAGGTCATTGATGTAAATTCTTTTGACCCACatgaaaatcaaaatgatgGTACAAATGCTGAGGCTCTTGAAAGGTTTGCTAAAAATCTGTATAAGGAGAAGCAGCTACGATTGGAAATGAAAGCAATGGagaaaatgaaattgatgaagaaaatgGGACGACCATTTCTTGAAGTTATATAA 1263 0.3539 MSHFLLFAFVFASHVIGGLNTKLPPPSYGSTITILSIDGGGIKGIIPTVVLEQLENALKIVSKDEKVVLADYFDVIAGTSTGGLITAMLTSPHPNDTSRPAFTAPDILKFYLDYGPSIFNETSAIGWNIGSNRPKYDGKFLYDIAYEILPETRLHDTLTNVVIPTYDIHNVHPVIFSSFKVKKVPTLDAKMADIALGTSAAPTLLPPIYFKNDGRDFNLVDGAVVASNPALLAVNEVIQQLNEKNSNFIPKKANEPTKILLLSLGCGITPSPIKINANIAKYFNATTWIQLIAKGLGDAVGDTNEYHLQTAISTLRSPKDYYLRIEEYDLDESISGADNTTKENMENLVKAGENLLKQPVKVIDVNSFDPHENQNDGTNAEALERFAKNLYKEKQLRLEMKAMEKMKLMKKMGRPFLEVI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00083 420 Pfam Patatin-like phospholipase 35 233 IPR002641 GO:0006629
Tsu08g00083 420 PANTHER PATATIN 2 407 - -
Tsu08g00083 420 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 234 IPR002641 GO:0006629
Tsu08g00083 420 Gene3D Cytosolic phospholipase A2 catalytic domain 25 403 - -
Tsu08g00083 420 PANTHER XYLOSE ISOMERASE 2 407 - -
Tsu08g00083 420 SUPERFAMILY FabD/lysophospholipase-like 32 363 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00083 Tsu-Chr8 757313 761887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00083 23 397 Miscellaneous Gene Families AT2G26560 43.590 2.73e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00083 - - cam:101513147 518.079