Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00080 ATGGCTgctttccttttgtttttgtttatttttgcaaGTCAAGTGATTGGTGGATTCAATTCAAAGCTACCACCTCCATCATATGGAAATACAATAACTATCCTAAGTATTGATGGAGGTGGCATTAAGGGGATCATTCCTGCTATAATTCTTAAGCACTTGGAAAAGGCTCTTCAGATTGTGGCAAAAGATGAAAAAGCAGTTTTAGTAGATTATTTTGATGTGATTGCCGGGACTAGCACCGGAGGACTCATTACTGCCATGCTTGCAAGTCCTCACCCAAATGACAATTCTCATCCTGCATTTACTGCTCCACAAATCTTAAAATCCTACTTGGATTATGGCCCTTCTATATTCAACGAAACTTCTGCTAGctGTTGGAATTATAGTACAAGGACTCCAAAGTTTGATGGCAAGTTCTTACATGAGAAAGCACATGAGCTATTGCAAGAAGCAAGATTGCATGACACGTTGACCAATGTTGTAATTCCAACCTTCGACATCAAGAAAATGCACCCAGTTATTTTCTCAAGTTTTAAGCTGAATAAAGTTCCTAGCTTAGATGCAAAAATGTCAGATATAGCCCTTGGGACTTCAGCTTTACCAACTCTACTACCACctatttactttaaaaatggTGATGAAGAATTCAATTTAGTTGATGGTGGTGTGGTTGCAAGTAATCCGGCATTGGTTGCAGTGAGTGAAGTGATACAACAATTGAATGAGAAGAATCCTAATTTCATTCGTGTGAAGGCAAATGAGCCTACCAAAATCGTGTTGTTGTCATTAGGATGTGGAACATCAAAGATTCAAGGGATTGATGCTAGATTGGCCCAATTCATCACATATGATGAATGGATACCCTTTATGGTTGGTGGTCTACTTGGTGCTGTTGGAGACACAAATGAATATCACCTTGCATCACTGTTCTCTGACCATTACTACCTTCGAGTTGAGGTTAGCTGA 969 0.3777 MAAFLLFLFIFASQVIGGFNSKLPPPSYGNTITILSIDGGGIKGIIPAIILKHLEKALQIVAKDEKAVLVDYFDVIAGTSTGGLITAMLASPHPNDNSHPAFTAPQILKSYLDYGPSIFNETSASCWNYSTRTPKFDGKFLHEKAHELLQEARLHDTLTNVVIPTFDIKKMHPVIFSSFKLNKVPSLDAKMSDIALGTSALPTLLPPIYFKNGDEEFNLVDGGVVASNPALVAVSEVIQQLNEKNPNFIRVKANEPTKIVLLSLGCGTSKIQGIDARLAQFITYDEWIPFMVGGLLGAVGDTNEYHLASLFSDHYYLRVEVS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00080 322 Pfam Patatin-like phospholipase 35 233 IPR002641 GO:0006629
Tsu08g00080 322 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 234 IPR002641 GO:0006629
Tsu08g00080 322 Gene3D Cytosolic phospholipase A2 catalytic domain 25 322 - -
Tsu08g00080 322 PANTHER XYLOSE ISOMERASE 1 311 - -
Tsu08g00080 322 PANTHER PATATIN 1 311 - -
Tsu08g00080 322 SUPERFAMILY FabD/lysophospholipase-like 31 314 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00080 Tsu-Chr8 701708 706663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00080 21 320 Miscellaneous Gene Families AT2G26560 44.237 1.33e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00080 - - cam:101513147 445.277