Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00069 ATGGCTTCTACGGCCGTTGCAACCGCTGATTCGCCGCAACATCCAATCACCGAACCCTCTCCTTCCTCCGTTGATCGTAACGATTCTTCCAATTCATCTCCTAACTTCTTCGCTGATGCTGAATTTCAGTCTCCGGATGTATTGAAGAGTGAAGAGTATCGTCAATTGTTTCGTCTTCCACAGGAAGAAGTCCTTATTGAAGATTTTAATTGTGCCCTCCAGGAAAACATACTTATTCAGGGTCACATGTACCTCTTTGTCAACTTCATTTGTTTCTACTCGAACATTTTTGGGTTTGAGACAAAGAGAATTATCCCACTCCCTGAAGTGACAGGCGTACGGAGGGCAAAGACAGCTGGGATCTTTCCAAATGCCATTGAGATTATTTCCGGGAGCAGGAAGCACTTCTTTGGATCCTTCCTATCCCGCGATGATGCTTTTAAGATTATTAATGATGGATGGTTGCGACAGGTCAATGATGCCAGATTAATCATGGAACAGCAGGAATCAATATCCGAACTCAGCAGCCAAGACAATGGATTTGTAACTGTTGACAATGTCAAAAGTTCTGATATACTTGACAATGAGGCACTTTCTACTGACCTGAGTCAAGGTACTTCTATGTGCAAAGATGAGGGAGTTCCGTCCATTGTTGGAGAAGACCCTACATTGATGGCTGTTCCAGAGAAGCAATCCAGTGTTGAACAGGTTGCTGAGTCTGAATTGAATAATAATCCCCCTAGAGTGAGTTCGAACTGGAATGAAGAGGATATTGATGCTCCGACAACCCCAGAAGGTTTTACGTGTGTTGCAGAATCAACGTTTCCGATAAAGGTTGAAGACTTCTTTAGGTACTTCTTCTCGGATGATGCAATAAATTTTCTTGAGTCTTTTCGTAAACAATGCGGCGATAAAGaCTTCAAGTGTGCTTCATGGCATCCTCAAGAGAAATTTGGGTATGCTCGTGAATTGTCATTTCAacatccaataaaaatttatcttGGAGCAAAATCGGGTGGCTGCCATGAGGTCCAGAAATATCGAGTTTATAGGAACAGTCATTTGGTTATACAGACATCGCAAGAAGTCAGTGACGTACCTTATGCAGATTATTTTCACGTTGAGGGACTGTGGAATGTAGAGAGAGACAAGGATGGATCAAAAGAATGCTGCATTTTACGGGTGTATGTGAATGTGGCATTTTGTAAGAAAACTATCTGGAGAGGCAAAATAGTACAGTCAACAGTTGACGAATGCAAAGAGGCTTATGGAGCATGGATAAACATgGCACATGAGTTCTTGAAACAGAAAAACCTTGTAAAAGAAGAAAGTGGTTCCGTTGCTGCTGTAGTTCAAAATGGCAAAATGATTTTTGATAGAGTAGCAAAGACGGGAGCAACCTCAGAAGGATCACAGGATCAAAGTAATCCTACAGGGCGGGAAACTACATCCAATGCCATTGATGATGCTATTCGCAATGTTAGTACTCAATTGCAAGGAAATTTCATTGGCACACCGTCTGTTCCGTCTTTGTTCAGAGAGTTTGCGACAAAGATTAGGTCATCTTTGAAAAATCAGAGCAATCTTTCGCTGCTACTTGTTACCATTTTTGCTCTGATTTTCTTCATGCAGCAGTTTAGTATCCTGATGTTGTTGGCCAGACCTCAACATATACATATGAACTCTCCTGTAGACTTTATGAATCAGATGGACAATGGAGTGACTATAAATCCTTCGGACATAGCGTGGTTGGAGAAAAGAGTTCATCACCTTAAAGATGAGATGTACATGGTTGAGACTAGGCTTGAAAGAATGCGAACAAGCGAGGAATTTGTGATTCATGAGAGAATTATCTCACTCCCTGAAGTAACAGGCGAACGGAAGGAAAAGACAGCTGGGATCTTTCCAAATGCCATTGAGATTATTTCCGGGAGCAGGAAGAACTTCTTTGGGTCCTTCCTATCCCGCGATGATACTTTTAAGGTTATTAATGATGGATGGTTGCGACAGGTCAATGATGCCAGATTAGTCTTGGAACAGCAGGAACCAACATCCGAACTCAGCAGCCAAGAGAATGAATTTGTAACTGTTGACAATGTCAAAAGTTCTGATATACTTGACAATGAGGCACTTTCTACAGACCTGAGCCAAGGTACTTCTATGTGCAAAGATGAGGGAGTTCCATCCATTGTTGGAGAAGACCCTACATTGATGGTTGTTCCAGAGAAGCAATCCAGTGTTGAACAGATTGCTGAGTCTGAATTGAATAATAATCCCCGTAGACTGAGTTCGAAGTGGAATGAAGAGGATATTGATGCTCCGACAACCCCAGAAGAATTTACGTGTGTTGCAGAATCAAAGTTTCCGATAAGGGTTGAAGACTTCTTTAGGTACTTATTCTCGGATGATGCAATAAATTTTCTTGAGTCTTTTCGTAAACAATGCGGCGATAAAGaCTTCAAGTGTGCTTCATGGCATCCTTGTTGTTTTGGGTATGCTCGTGAACTGTCATTTCAACATCCAATAAAAGTTTATCTTGGAGCAAAATTGGGTGGCTGCAATGAGGTCCAGAAGTATCGAGTTTATAGGAACAGTCATTTGGTTATACAGACATCGCAAGAAGTCAGTGACGTACCTTATGCAGATTATTTTCATGTTGAGGGATTGTGGAATGTAGAGAGAAACAAGGATGAATCAAAAGAATGCTGCATTTTACGTGTATATGTGAATGTGGTATTTTGTAAGAAAACTATCTGGAGAGGCAAAATAGTACAGTCAACGGTTGATGAATGCAAAGAGGCTTATGGAACATGGATAAACAtgGCACATGAGTTCTTGAAGCAGAAGAACCTTGTAAAAGAAGAAAGTGTTGCTGCTGTTGTTCAAAATGGCAAGACAATTTTTGATAGAGAAGCAAAGACAGGAGAAACTTCAGAAGAATCACAGGTTCAAAGTAATCCTAAAGGCAGAGAAACTACATCCTATGCCATTGATGATTCTATTCGCAATGTTAGTACTCAATTGCAAGGAAATTTCATTGGCACATCGTCTATTCCATCTTTGTTCAGAGAGTTTGCAACAAAGATTAGGTCATCTTTGAAAAATCAGAGCAATCTTTCGCTACTACTTGTTACCATTTTTGCTCTGATTTTCTTCATGCAGTTTAGTATACTGATGCTGTTGGCCAGGCCTCAACATATACATATGAACCCTCCTGTAGAGTTTATGAATAAGATGGACAATGGAGTGACTAGAAATCCTTCCGACATAGCGTGGTTGGAGAAAAGAGTTTATTACCTTAAAGATGAGATATACATGGTTGAGACTAGGCTTGAAAGAATGCGATATGAGCATGCTCTCATAAAAAAGCAACTAAAAGATCTAGAACATATATAG 3396 0.4037 MASTAVATADSPQHPITEPSPSSVDRNDSSNSSPNFFADAEFQSPDVLKSEEYRQLFRLPQEEVLIEDFNCALQENILIQGHMYLFVNFICFYSNIFGFETKRIIPLPEVTGVRRAKTAGIFPNAIEIISGSRKHFFGSFLSRDDAFKIINDGWLRQVNDARLIMEQQESISELSSQDNGFVTVDNVKSSDILDNEALSTDLSQGTSMCKDEGVPSIVGEDPTLMAVPEKQSSVEQVAESELNNNPPRVSSNWNEEDIDAPTTPEGFTCVAESTFPIKVEDFFRYFFSDDAINFLESFRKQCGDKDFKCASWHPQEKFGYARELSFQHPIKIYLGAKSGGCHEVQKYRVYRNSHLVIQTSQEVSDVPYADYFHVEGLWNVERDKDGSKECCILRVYVNVAFCKKTIWRGKIVQSTVDECKEAYGAWINMAHEFLKQKNLVKEESGSVAAVVQNGKMIFDRVAKTGATSEGSQDQSNPTGRETTSNAIDDAIRNVSTQLQGNFIGTPSVPSLFREFATKIRSSLKNQSNLSLLLVTIFALIFFMQQFSILMLLARPQHIHMNSPVDFMNQMDNGVTINPSDIAWLEKRVHHLKDEMYMVETRLERMRTSEEFVIHERIISLPEVTGERKEKTAGIFPNAIEIISGSRKNFFGSFLSRDDTFKVINDGWLRQVNDARLVLEQQEPTSELSSQENEFVTVDNVKSSDILDNEALSTDLSQGTSMCKDEGVPSIVGEDPTLMVVPEKQSSVEQIAESELNNNPRRLSSKWNEEDIDAPTTPEEFTCVAESKFPIRVEDFFRYLFSDDAINFLESFRKQCGDKDFKCASWHPCCFGYARELSFQHPIKVYLGAKLGGCNEVQKYRVYRNSHLVIQTSQEVSDVPYADYFHVEGLWNVERNKDESKECCILRVYVNVVFCKKTIWRGKIVQSTVDECKEAYGTWINMAHEFLKQKNLVKEESVAAVVQNGKTIFDREAKTGETSEESQVQSNPKGRETTSYAIDDSIRNVSTQLQGNFIGTSSIPSLFREFATKIRSSLKNQSNLSLLLVTIFALIFFMQFSILMLLARPQHIHMNPPVEFMNKMDNGVTRNPSDIAWLEKRVYYLKDEIYMVETRLERMRYEHALIKKQLKDLEHI 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00069 1131 MobiDBLite consensus disorder prediction 465 484 - -
Tsu08g00069 1131 MobiDBLite consensus disorder prediction 971 992 - -
Tsu08g00069 1131 Gene3D - 49 157 IPR011993 -
Tsu08g00069 1131 Gene3D - 580 670 IPR011993 -
Tsu08g00069 1131 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 616 1129 - -
Tsu08g00069 1131 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 4 612 - -
Tsu08g00069 1131 MobiDBLite consensus disorder prediction 1 36 - -
Tsu08g00069 1131 Pfam GRAM domain 53 154 IPR004182 -
Tsu08g00069 1131 Pfam VAD1 Analog of StAR-related lipid transfer domain 783 929 IPR031968 -
Tsu08g00069 1131 Pfam VAD1 Analog of StAR-related lipid transfer domain 270 417 IPR031968 -
Tsu08g00069 1131 CDD PH-GRAM_GRAMDC 62 154 - -
Tsu08g00069 1131 ProSiteProfiles VASt domain profile. 266 438 IPR031968 -
Tsu08g00069 1131 MobiDBLite consensus disorder prediction 978 992 - -
Tsu08g00069 1131 ProSiteProfiles VASt domain profile. 779 950 IPR031968 -
Tsu08g00069 1131 SMART gram2001c 51 117 IPR004182 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00069 - - gmx:100805910 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00069 08 614638 631268 Tsu08g00069 08 614638 631268 ECH