Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00056 ATGAACTTCTTGAAGCTTTTCTTAGTTGCATTAGCTCCAGTTATGAACACTTTGATCATTGCTGTTATTGGGGCTATCCTTGCACTTGACAACATTGGCATACTCAGAAAAAATACCAAGAAGCATCTCAATATTATGGTATACTTTGTCTTCACTCCAGCTCTTCTTTATAGCTGCCTTGCTAAAATTATAACTTGGAAGAGCTTGGTTATGCTGTGGTTCTTGCCATTAAATATTCTTCTAAGATATATTATTGGGATAGCTCTTGCATGGATTCTAGCTAAAATAACTAGAGCTCCTCGTCATCTCCATGGCCTTGTGATGGCCTCTTGTGCTGCAGGAAATTTGGGTTCTTTGCCTCTTGTTATAGTTCCAGCTATTTGTAAAGGAAGAAGCCATCCTTTTGGTTATGTGGATTCTTGCTACCATAAAggattagcatttacttctcTAACAATGGCAGTAGGACACATTTATGCTTGGTCTCTTGTGTACAATATTCTCCGCATATATACACCTAAGACCAATGTTGTCAAATTTGATGAATCCACAAAACTTGAAGAGATCAATAATCTAGAAAACTTTTCAAAATGTTCATCAAGAGCATTGACCCCAATTGAAGAAAAATCATTATCCAATGATTGTATTGATCAACTAGAAATAGAATGTAAAGTGATTGATGGACAAGAAAAGGTTGTTGTACAAGAAAAGTCAAATATTATGAAACAACTTAACATATTATTATGTGACAAGGACAATTTGAAAGCACTATTTGCACCTGCATTGTGGGGAGCGATCTTTGGAGTAATAATTGGCATAGTTCCTCAATTTCGAAAAGTACTAGTTGGTGAAAGTGCTCCTCTCCATGTGGTTCAAACATCTATAGTTATGTTGGGgGATGCATGTATTCCAGCAATGATCTTATTAGTTGGAGCAAATCTTCTTAAGGGTTTAAAGGGATTAGGCAAGAAAATTCCACTTGTTGTTGGTATTATTGTGGTTATGTATATTGCATTGCCAGCAATAGGTATAGCCATTGTGAAAGGTGCAGTTCATTTCAGCTTCATAAGCTCTGATCCATTATATCAATTTGTTTTGCTACTTCACTATGCTGTTCCTCCTGCTGTATCTGTTAGTACAATGACTCAATTGCTTGGAGTTGGTCAAAGTGAATGCTCACTTATCATGTTTGCAACTTATTCATCAGCTCCAGTTTTACTTACCCTTTGGTGTACAGTCTTTATGTGGCTTGTGCTATAA 1260 0.3579 MNFLKLFLVALAPVMNTLIIAVIGAILALDNIGILRKNTKKHLNIMVYFVFTPALLYSCLAKIITWKSLVMLWFLPLNILLRYIIGIALAWILAKITRAPRHLHGLVMASCAAGNLGSLPLVIVPAICKGRSHPFGYVDSCYHKGLAFTSLTMAVGHIYAWSLVYNILRIYTPKTNVVKFDESTKLEEINNLENFSKCSSRALTPIEEKSLSNDCIDQLEIECKVIDGQEKVVVQEKSNIMKQLNILLCDKDNLKALFAPALWGAIFGVIIGIVPQFRKVLVGESAPLHVVQTSIVMLGDACIPAMILLVGANLLKGLKGLGKKIPLVVGIIVVMYIALPAIGIAIVKGAVHFSFISSDPLYQFVLLLHYAVPPAVSVSTMTQLLGVGQSECSLIMFATYSSAPVLLTLWCTVFMWLVL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00056 419 PANTHER - 1 418 IPR045033 GO:0080162
Tsu08g00056 419 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 418 - -
Tsu08g00056 419 Pfam Membrane transport protein 12 410 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00056 Tsu-Chr8 487781 493549 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00056 K24139 - gmx:100807965 441.425