Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00055 ATGGGGATGATCATGAGTTATATGGGAGGATCAGGTGAGGGATTAGCATCCCAGACTTTAAATCTTGTATCAGGAGCACTCTATGATCAATTTATGAAGAAAGAAGTCAAAAGCTTTGATGCCTTCCACACTGCCATTCTTGATATATTCAAcaCTATCAACATGGCCTTGCCTGGTAAACATTATGATGTACCATCAAACAAGGAGATTGAgAACTTTTTTAAACAATGGAATGAATCCAaggaagaaaataagaaaaatattttcactGATTTCATGATTAAGTATGTAAATATCAGCAAAGTAGATAATTCTATGATGGTCACTGGAATAGTGGCACCTCCTGCAGCTATGGTAGCCAAGAGATCAGGACAATCAGTTCCTCAGTTAAGTGCTTTGAAAGTCATTCCTGATGTTATCTTTGTACCAACTGCTACAATTTTGGCTCTCATTGCTGTCAAGGTTACCAAAAGAATGTCAATCAAGAAATTGAATCCTATTTAA 504 0.3472 MGMIMSYMGGSGEGLASQTLNLVSGALYDQFMKKEVKSFDAFHTAILDIFNTINMALPGKHYDVPSNKEIENFFKQWNESKEENKKNIFTDFMIKYVNISKVDNSMMVTGIVAPPAAMVAKRSGQSVPQLSALKVIPDVIFVPTATILALIAVKVTKRMSIKKLNPI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00055 167 PANTHER CALCIUM ION-BINDING PROTEIN 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00055 Tsu-Chr8 468384 469523 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00055 1 147 EF-hand Containing Proteins AT1G64850 22.078 1.13e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00055 - - var:108347314 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00055 08 468384 469523 Tsu08g00055 08 468384 469523 ECH