Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu08g00044 | ATGGCAGGCTCAGAAGGATTCGTTGGAGCTGAAAATGCAGAAGCCATTATTACAAGAATTGAACACAAAACCCGCAAGATCGAAAGCTTACTCAAACAGTATAAACCTGTGGAAGCCCTTAAAACTGCACTTGAAGGAACTTATGCAATGACTAGTGATGAGCGTTGCAAGTCGGCGCATTGGATTGTTGTGCATAGAGCAATAATGGCTATAAAAGATGTGGATGGGATGCTTTCTTCCTTGGATCCTGAATACTATGATATTCTAATGAAGTATTTATATAGGGGCTTATCTACCGGAGATCGTCCAACATGTGATCAATGTCTCCGAATTCATGAAAAGTTGACAGAGAAAGCGGGCCATGGTTGTATTCTACGTTTCTTGACTGATACTGTAAATACAGTTTGA | 408 | 0.4044 | MAGSEGFVGAENAEAIITRIEHKTRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAHWIVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGHGCILRFLTDTVNTV | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu08g00044 | 135 | PANTHER | ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC | 5 | 133 | IPR006789 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Tsu08g00044 | 135 | Gene3D | - | 17 | 132 | IPR036743 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Tsu08g00044 | 135 | Pfam | ARP2/3 complex 16 kDa subunit (p16-Arc) | 14 | 131 | IPR006789 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 | |
| Tsu08g00044 | 135 | PANTHER | ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5 | 5 | 133 | - | - | |
| Tsu08g00044 | 135 | SUPERFAMILY | Arp2/3 complex 16 kDa subunit ARPC5 | 10 | 131 | IPR036743 | GO:0005885|GO:0015629|GO:0030833|GO:0034314 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu08g00044 | Tsu-Chr8 | 423666 | 427153 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu08g00044 | K05754 | - | gmx:100809745 | 255.758 |