Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00041 ATGGCTTTAATGGCTGGTTGTCAAGCTGTTTTGGATGGAAGTCTTCAATTGAGTGGCTCAAACAGATTCAACAAGGTAACAACACGTTCATCAGTGTCTGTTGTTAGAGCACAACAAAACCAGGAAAGTAGCAGAAGAGCAGTGATTGGTCTTGTTGCTACTGGTTTGGTTTCTTCCTCTTTTGTTGGTGCTGTTCTTGCTGAAGCCATTCCTATTAAAGTTGGTCCCCCTCCTCCACCTTCTGGTGGCCTTCCTGGAACACTGAACTCAGATGAAGCAAGAGACCTTGCGTTACCATTGAAAGAAAGGTTCTTCCTTCAACCATTGACACCTACTGAGGCAGCTGCAAGAGCTAAGGAATCAGCAAAGGAAATTGTTGATGCTAAGAAGTTCATTGACCAGAAGGCTTGGCCATTTCTTCAGAATGATCTCCGTCTCAGGGCTGGCTATCTTCGATATGACCTTAACACTATCATCTCTTCAAAGCCTAAGGACGAGAAAAAATCCCTCAAGGAACTCACCGGAAAGCTCTTCCAGGATATCGACAATCTGGATCATGCAGCAAAACAAAAGAGCCCCTCAGATGCAGCGAAGTACTATGATATAGCTGTATCTACTCTGAATGATGTTCTTAGCAAAATTGGTTAA 648 0.4367 MALMAGCQAVLDGSLQLSGSNRFNKVTTRSSVSVVRAQQNQESSRRAVIGLVATGLVSSSFVGAVLAEAIPIKVGPPPPPSGGLPGTLNSDEARDLALPLKERFFLQPLTPTEAAARAKESAKEIVDAKKFIDQKAWPFLQNDLRLRAGYLRYDLNTIISSKPKDEKKSLKELTGKLFQDIDNLDHAAKQKSPSDAAKYYDIAVSTLNDVLSKIG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00041 215 SUPERFAMILY Oxygen-evolving enhancer protein 3, 104 214 IPR023222 -
Tsu08g00041 215 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 215 - -
Tsu08g00041 215 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 215 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Tsu08g00041 215 Gene3D - 68 215 IPR023222 -
Tsu08g00041 215 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 25 215 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00041 K08901 - mnt:21397967 270.781