Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00040 ATGGTGCTTAATTCAGAATCAAACAACCCTACACCACCTATGAATCCCACCACACCAATAAACCCTCCAGCACCATCGTCATTATCACAAGCAATGGTGACATCCACTCCATTTTACCATATTCCAACCTTTAGCCATAACTTGACCACACCAAACAATTTTGGATGGACTGGAAACCATCCAAGTCTTTTCCCTAACTATGATGGAACGAACCCAATACAACACGTGGGATCATCTTCAAACCAAGTGGAGAACTTAACTAGGCCAATTCTCCAGTTAGGCTTAGGCCCATATCCAAGCCTCTCGGAGACCCACCTAAATCGCAATACATTTTTCCGTTTTGGTTCCGAGACAAACCaaaatgaaaatacaattaGCTCTCTTTTGCAATTAGGTTCAAACTTGAACCGTGACCAAGCCAAAAACAATTCTTTTTTGCAATTAGGATCGTCTTCGATCCTAagagatgaaaataaaaatgttctTGTTCTGGGTCATAGTTCCTCCTCGAACCGTGATGAGAATAGAAGCATTAACTCCAATTTGAACAGACTTGAGAACAAAGGCATTAACCTTGATTTGAATTatgttgaaaaaaatgaaattcgtGGCTTTGAGTTTCACGCTTTGCGGATGGATCCAGTCGAGCTTGTAAATGAGACTGAGGAAAAGGAAATTAGTCTTGTACTGGGTCTAGGTTCCTCCCAAAATGTAGTTAAGAATAGAGACACTAACCCTAGCTCGAATAGGGTTAAGAAGAATGAAACTAGTGGCTTCGAGTTTCTCTCTTTGGCGTTAGATCCAGCTAAGCCAGTAAGTGAGGGTGAGAAAGCTGTTATTAGACATATGTCGGGTCATAAATCCTCCTCAAACCAGGTTGAGGATAAAAACATTAACCCTAGTTCGAATTGGGTTGAGAACAACAAAATTAGTGGCTTCGAGTTTCACGCTTTAGCTTTGGATCCAATCAAGCCAAAAAGTGAGGCCAAGAAAACCAAAATTAGTTTTGTGCCGGGCCATTATTCCTCCCCAAATCGGACTGAGAATGGAGGCATTAACTCCGATTCCATCCAGGTTGAGAAAATTTTTGAGCTTTGCAATTTGGCGTTGGATTCAGCCGAGCCAATAAGTGAAAAAGAAGTGGTTgacaaaaaccaaaatcaattggATCTGATTCAGAAGGGAAAATCGAAAGTCTCTATTGGATCTCCAGTGAAGGCTAAAGGTTCTAGCGAGAACAACAATGATGGAGAAGGTGACATAGAAGTGGAAGATGAAGTGGGGACTGAATGTTCAGATGAAGAATCAAACACTCAATTCGTCAAAACGTGGAATTTGAGGCCCAGAAAGCCGCGGGTGAACCCTGAGAAACAAGGAAACAATGGAGGTGGCGGAAGATCAAGGAAGAGTGCGACACCGACGAGGGTAAGCAAGCCCCGATCTGCTGCAAAGAGTCGACCGCTGCCTAAGGTGGAAAGACCCTTGATGGACAAGCGCGAGTTGGTGATATCTCTTACTAAGGAAGAGATTGAACATGACTTCATTTTAATGACCGGAGAAAAGCCTCCTAAAAAACCTATTAGAAGATCGAAGGCCGTGCAGAAAAACCTTGATGATATTTTTCCAGGCATGCATTTAACCAACATAACACCCGAGCGCCTATACTTTCAAGCACAGGTTCTTCTTTGTGTTGACTTTTCAATGGCTTCTTCACCTATTAGTTACACTGCAATATTACCTGAAACAGAAGAGCTTCATATACAACACATAATTAACATTCCTAAAGAGATTAAGCCAGCACTTCATGAGATCTGTTGCATTTACAAGTTTGTAGACATGATCATGTTAGATTCTGTTTTCATCTTAGAACTGTTTCTAAGAAAGTCAAAGGAATCTGAAAGAGACAAAGATTACATGTTCACAACATCATGGATTTGCAAGGCTATACAAAGAGATTTATTACTTCTTGAAAATCAGCTtccaatttttgttttggaaCAATTATATCAAAAAGTTTTCAAGGATAATAataatggtttcaattttcttgaGCTTGCATTTAACTACTTTGAAAATTTCAATCCACAAAGATCAAACAAACATCAAAATGAAGAGATGTTAAAGAATTGTAAATCATGCAAACACTTCACTGATTTGATAAGATGTTTTTATCTTCCGAAAGAAGTTCATGACAAAAAGTGGGATCGATCGGCGCATTTCACTGATGTTAATAGTGAAGATAAATGTATCCTTAAGACGGCGAAAATGTTGCATGATGCAGGAGTTAGTTTTGAGAAAGTTAATCAGAAAAGCTTATTAGAAATAAAGTTCGACAAAGTTCAAGTTCTCAATTGGTTTCTATGCTTAGGTTGTTTACCATGTTTCAGATTTGTTAAATCTAAGTTGTTAATGTCTCAATTCAAAGTAAGTCAAAACAAAGAATGTATTCTTAGGAACCTAATTGCATTAGAACAATGTCATTATTCAGATCAACCTTTTATATGCAACTATGTTTCTTTAATTGATGCTCTTATCAATACACAAGAGGATGTTGAAATTTTGGTTGATAAGGAAATCATTGTTCATGAACTTGGAAGCCATGTTGAATTGGCAACTATGATAAATGGTTTGTGCAAGAATGTTGTGGTAACATGCAATTATTATGGAAAAACCACAAAGAAATTGAATGCTCATTACTATAATAGTTGGAAGAATTATATGGGTGTGTTAAGATCAGTTTATTTTCGCGATCCTTGGAGATTCAGCTCGGTTGTTGTAGGTGTTGTTATCTTCACAGTTGCTATTGTCAATTTTCTTCGTATTACTGGTGTATATCGTCCAAGATACTAG 2850 0.3695 MVLNSESNNPTPPMNPTTPINPPAPSSLSQAMVTSTPFYHIPTFSHNLTTPNNFGWTGNHPSLFPNYDGTNPIQHVGSSSNQVENLTRPILQLGLGPYPSLSETHLNRNTFFRFGSETNQNENTISSLLQLGSNLNRDQAKNNSFLQLGSSSILRDENKNVLVLGHSSSSNRDENRSINSNLNRLENKGINLDLNYVEKNEIRGFEFHALRMDPVELVNETEEKEISLVLGLGSSQNVVKNRDTNPSSNRVKKNETSGFEFLSLALDPAKPVSEGEKAVIRHMSGHKSSSNQVEDKNINPSSNWVENNKISGFEFHALALDPIKPKSEAKKTKISFVPGHYSSPNRTENGGINSDSIQVEKIFELCNLALDSAEPISEKEVVDKNQNQLDLIQKGKSKVSIGSPVKAKGSSENNNDGEGDIEVEDEVGTECSDEESNTQFVKTWNLRPRKPRVNPEKQGNNGGGGRSRKSATPTRVSKPRSAAKSRPLPKVERPLMDKRELVISLTKEEIEHDFILMTGEKPPKKPIRRSKAVQKNLDDIFPGMHLTNITPERLYFQAQVLLCVDFSMASSPISYTAILPETEELHIQHIINIPKEIKPALHEICCIYKFVDMIMLDSVFILELFLRKSKESERDKDYMFTTSWICKAIQRDLLLLENQLPIFVLEQLYQKVFKDNNNGFNFLELAFNYFENFNPQRSNKHQNEEMLKNCKSCKHFTDLIRCFYLPKEVHDKKWDRSAHFTDVNSEDKCILKTAKMLHDAGVSFEKVNQKSLLEIKFDKVQVLNWFLCLGCLPCFRFVKSKLLMSQFKVSQNKECILRNLIALEQCHYSDQPFICNYVSLIDALINTQEDVEILVDKEIIVHELGSHVELATMINGLCKNVVVTCNYYGKTTKKLNAHYYNSWKNYMGVLRSVYFRDPWRFSSVVVGVVIFTVAIVNFLRITGVYRPRY 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00040 949 MobiDBLite consensus disorder prediction 395 493 - -
Tsu08g00040 949 Pfam Protein of unknown function (DUF1639) 505 553 IPR012438 -
Tsu08g00040 949 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 609 945 IPR004158 -
Tsu08g00040 949 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 569 609 IPR004158 -
Tsu08g00040 949 PANTHER DUF247 DOMAIN PROTEIN 609 945 - -
Tsu08g00040 949 PANTHER DUF247 DOMAIN PROTEIN 569 609 - -
Tsu08g00040 949 MobiDBLite consensus disorder prediction 460 479 - -
Tsu08g00040 949 MobiDBLite consensus disorder prediction 417 432 - -
Tsu08g00040 949 Pfam Plant protein of unknown function 608 931 IPR004158 -
Tsu08g00040 949 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00040 Tsu-Chr8 390353 397844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00040 - - gmx:100801122 465.692