Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00039 ATGCTGTTGAATGTCTATCATGCTATTGGATATTTAAAGCACAGGTTCTTCTTTGTTGACTTTTCAATGGCTTCTTCACCTATTAGTTACACTGAAATATTATCTGAAACAGAAGAAATTCATATAGAACACATAATTCATATTCCTAAAGAGATTAAGCTAGCAGTACTCCATGATATATGTTGTATTTACAAGGTTCCTCCCAATCTTAGAAAGTTGAATAATGGAGAGTCCTATACACCACAATTAATCTCAATTGGTCCTTTTCATTGCACCAATGAAGAATTGAAGCCAATGCATACACAAAAACAAAGAATCAATGATGATCAGTTTGTGGACATGATCATGTTAGATTCTGTCTTTATCTTAGAACTGTTTCTAAGAAAGTCAAAGGAATCTGATATGAAAGAGGATGATTACATGTTCAAAACATCATGGATTTGCAAGAGTATACAAAGAGATTTGTTACTTCTTGAAAATCAGCTTCCAATATTTCTCTTGAAACATTTACATGAAAAAGTTTTCAAGGAAAATGAAAGTCTCAATTTTCTTGAACTTGCATTTAACTACTTTGAAGATTACAATCCACAAAGATCAAACAAACATGAAAATGAAGAGATGTTAAAGAATTGTAAACCATGCAAACACTTCACTGATTTAATAAGATGTTTTTACCTTCCAAAAGAAATTTATGACAAAAAGTTGCCGCGATCGGAGCATTTCACTAAGGAAGATAAATATTGTGTCCTTAAGACAGCAACAAAGTTGAATGAGGCAAGTATTAGCTTTGAGAAAGTTCATCAAAGAAGCTTATTAGAAATAAAGTTGGTCAAAGTTCAAATTCTCAATTGGTTTCTATGCTTTGGTTGTTCaccatttttgaaatttttgaaatcAAAGTTGCAAATTCCTCAATTCAAAGTAGACCAAACAACAGAATGTGTTCTTAGGAACCTTATTGCATTGGAACAATGTCACTATTCAGAAGAACCTTTCATATGCAACTATGTTTTTCTAATTGATTCTCTTATCAATACACAAGAGGATGTGGAAATTTTGGTTGATAAGGAAATCATTGTTCATGAACTTGGAAGCCATGTTGAATTGGCAACTATGATAAATGGTTTGTGCAAGAATGTTGTGGTAACATGCAATTATTATGATAAAACATCGAAGAATTTGAATGATCATTACTATAACCGTTGGAAACGTTATATGGGAATGTTGAGATCAGTTTATTTTCGCGATCCTTGGAGATTCAGCTCAGTTGTTGTAGCTATTAATCAAGTCTTGTTCTCTTTTGTCTCAATTGCATTATTTTTACCATCACTTTTGGTTACCAATTTACTCTTAAAGTTGTTGCTTACTGTTTCTTGGGATACAATCAATGGAACAACATTTGGAAATGGGAGGGATCAGGATTCACTGTTGTAG 1434 0.3194 MLLNVYHAIGYLKHRFFFVDFSMASSPISYTEILSETEEIHIEHIIHIPKEIKLAVLHDICCIYKVPPNLRKLNNGESYTPQLISIGPFHCTNEELKPMHTQKQRINDDQFVDMIMLDSVFILELFLRKSKESDMKEDDYMFKTSWICKSIQRDLLLLENQLPIFLLKHLHEKVFKENESLNFLELAFNYFEDYNPQRSNKHENEEMLKNCKPCKHFTDLIRCFYLPKEIYDKKLPRSEHFTKEDKYCVLKTATKLNEASISFEKVHQRSLLEIKLVKVQILNWFLCFGCSPFLKFLKSKLQIPQFKVDQTTECVLRNLIALEQCHYSEEPFICNYVFLIDSLINTQEDVEILVDKEIIVHELGSHVELATMINGLCKNVVVTCNYYDKTSKNLNDHYYNRWKRYMGMLRSVYFRDPWRFSSVVVAINQVLFSFVSIALFLPSLLVTNLLLKLLLTVSWDTINGTTFGNGRDQDSLL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00039 477 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 107 441 IPR004158 -
Tsu08g00039 477 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 24 105 IPR004158 -
Tsu08g00039 477 PANTHER DUF247 DOMAIN PROTEIN 107 441 - -
Tsu08g00039 477 PANTHER DUF247 DOMAIN PROTEIN 24 105 - -
Tsu08g00039 477 Pfam Plant protein of unknown function 106 428 IPR004158 -
Tsu08g00039 477 Pfam Plant protein of unknown function 63 106 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00039 Tsu-Chr8 375657 379853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00039 - - gmx:100801122 490.345