Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00038 ATGGGGTTTATATGTAaaggtgtaatatttttttcatcaatacTAGTGTTGCTATCAACCACAACATGTGCAATTTATTCAGGAGctgaatttgaaaataaaaatataaaatcagcTACTTTTATTTCTGAAATGTTTGAAGTGGGTCCCGGGAAAGTCGCAGCTAAAACTTTTTTTGATGTTCAATTTCCAAAAGGTCATGTTGGAATAAAGAGTTTTGATGCTGAACTAATTGACGAAGAAGGAAATTCAGTACCATTATATGAAGCATACCTACATCATTGGTTTGCTATAAAATATCAAGCAAAAGATTGGAATATGTCAAAAATAATCCCTAAGAATCCAATGGAAGGTGCCAATTTCATTCGAAATGATGGAACATGTAATGGTTATATTCTTCCACTTTATTGGGGTTTAGGAGGTGAATCACGaggaacaaaatcaaaaattcCTGGTCCTTATGCTGTAGAACATGGTAACCCTTCAAAAATTCCATTTGGATACCAAGAAAAGTGGCTCCTAAATCTCTTGATCATTGATACACGTGGCACAAAAGATAGAAAACGTTGTACTGAATGCAGGTGTAACCATTTCAACTTGCCCAAGAATTTTTATAACACCACGTCTGGCATTGATGGCAAACCAGTGGGCTCAAGTTATGAAGGAGGACTCTTTTGTTGCCAAGATAATTTACAGTGCAAATTAAAAAAGGATTTTGAAGCACCTACGAGAAAGCTTGCCCTGAGATACAAAATAACATGGGTTGATTGGAACCAACAACAAATTCCTGTAAGATTTTATATACTTGATTCAACTGATCGAGTTAGAACAAATGGTTCTCAAGTTATTCACGATTGTCAGCTAGAGTTTACAGTCCCACCAAATAATGGTAGAAAGAATTCTGCTCCTCATATTGAAAAAGCAAGCATTCCAATGGAAAGAGGTGGTTATCTCATATACGGCACAGCTCATATGCATACAGGTGCCATCAACGCAACTTTATACGGACAAgATGGAAGAACTTTGTATACCTCAAAACCAACATATGGAAAAGGAAAGGAACCAGGAAATGAGAAAGGCTATGTTGTCGGGATGTCAGGAAATTATCCAGAATTAGGTTCAATCAAGATTAAAGATGGTGAAATTTTGTTGGTGCTAACAAAAATTTTGAGTtgttttttgcattttgatttCTTCTCTACTTgtaaaaaaagaagagaaatttgTGTTTCAATGGATTCTGAAACAAAACCACAAATTCAGCACATAATTAACATTCCAGAATTGATTGAACCTATGTTACATGATCAATGTTGCATTTACAAGTCACAATTCAGAGCTAAATCAAGAGAAACAGAAACAAAGAAAAATGATTACATGTTTACGACATCGTGGATTTATAAAATCACACAAAGGGATTTGTTACTGCTTGAAAATCAGATTCCTATGGTTGTTTTCGAGGAATTGCACAAAAGGGTCTTATTAGGCGATAACAATAATGGTTGCAATAAGGAAAATTGTGTTAGTTTTATTGAGCTTGCTTTTAACTACTTTGACGATTATTATCCTCAAAAGTTAAGCTCAAAAGATGAGATGATTCGGAATTGTAAATCCTGCAAACACTTCACTGATTTGATTAGATATAGTTATCTTCCGAGAGAAATTCAAGAAAAGGGTGTGAATCCATCGAAGAATTTCACGCCTTTTAGATCAGAATTTGTACTAAGGACAGCAACAAAGTTGAATGAAGCAGGTATTAGCTTTGATAAAGTTCAAGGTAGAAGCTTTTGTGACATAAGTTTTACCAAGACACCGATTTTGAGCTGGTTTTTGTGCTTAGGTTGTTTACCatgtttaaaatttgtcaaatcaAAGTTACAAATTCCGCATTTGAATGTAGACCAAGGAACAGAATGTGTTCTTAGGAACCTCATTGCGTTCGAACAATGTCACTATTCCGACCAACCTTTCATATGCAACTATGTTTCGTTGATTGATTCTTTGATTCATACACATGAAGATGTTGAATTGTTGGTTGACACAGAAATCATTAACCATGAACTTGGGAGTCATGCAGAATTAGCAACTTTGGTTAATGGTCTTTGCAAACGTGTTGTGGTGACATCAAATTGTTATGGCGAAGTTGTAAAGGAACTGAATGAACATTATAATAACTGGTGGAAGCATTATATGGGAATGTTGAGATCGGTTTATTTTCGCGATCCTTGGAGACTCAGTTCAACTGTTGTTGGAGTTGCTATTTTCTTATTTGCTGCTGTCAATTTTCTTAAAGTTATTGGTGTATTTAGTCCTAAAGAAGCTCACTCCGATTTGTATCCACCAACCAACAGGAAAAACAATATTATGGCAACCGATAATACTTCTTCTGCTATTTTATCTGAATTTGAGATGGTGAAACACATAATCGACATTGAAGCCTTAGAAGAATTAAGCTTAGCAGAGTGTAGCATCTACAAGGTTCCTCCCAATCTTCGAAAAGTGAAACAAGAAGCTTACACTCCTCAATTAATCTCAATCGGTCCAATTCACCTTGGCAAACAAGAACTTCAATCAATGCAACAACACAAAAAAAGGTACTTCCATTTCTTTTTCGAGCGTCTATCGCAATTCAATCAACAATCAATGATCAAGAATTACAAAACCTATCTCGAatacaaagaacaaaaaataagaaactgTTATGCAGAGAAATTTCCAAACATCAGCAAAGAGAAATTTGTCGAAACAATTTTGTTGGATGCTGTTTTCATCATGGAACTTTTGTTAAGAAACAGTTCTTGGAAATCAGATAAATCAAAACATGAACATGAATATGTCCAATCCAAGTCGTTTCGATGGAAACATAGTGATGATTACATTCTCACACAAGCTTGGTTGAGTAAAAGCATCACAAGGGATTTGATTTTGTTGGAAAATCAAATACCTTTTTTTGTGTTGATGAATCTCTATGAAACTGTTGTCCCTAAAGACGATAAAAAACCGGAACATGAAAATTTTCGTGATCTTGCACTTGAGTATTTTGCATTCTATGATACTCAGAAATCGTCTTCAAGCGAAACTAAGCTTGTTTTGGATAAGAATCAGAccaagaaatatttttttgtcagtGGTATACTTGGTGATGTTAGTAGTGGTAATTCAAtttcgaagaaaaaaaattccgaAAAATCTATGAGTAGGTTTCAAGGTCCTAAGCATTTCACCGATTTGATAAGGTTTTTTTACCTTCCATCTGATTTAGGAAAAAGTGGTTGTTCTCATAATTTCCCAAGAACGGTAACAAAGTTAATGGATTCCGGTGTGAGTTTCGAGAAAGTTGTTGAGAGAAGATTACTCGATATAACATTCGAGAAAAAACCATTTCTAAGTTATTTTCTCTGCTTAGGTTGTTTACCTTCATTTTCATGTTTGAACCATTTCAAAGCGCGTCTCAGAATTCCACAACTGAAAGTTGACCACACAACAGAATGTGTTTTACGTAACCTAATTGGGCTCGAACAATGTCAATATCAAGAACAACCTTACATATGCAATTATGTTTCACTTATTGATTCTCTTATACATACTCAAGTTGATGTTGATTTTTTGGTTGAGAAAGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTGGCAATGCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCGACATACTACTATGATATTATTAATGAGCTTAATAAACATTATCAAAATATTTGGAACCGTACTATGGCTGCATTGTGGTTGGTTTATTTTAGAGATGCTTGGAGAGCAAGTTCTACTTTGGTTGGAATTGCATTTCTTGTTTACACTGCATTCAACTTTGTTCGTCTTGCAAAAGTTCTCTTCTACTAG 3891 0.3333 MGFICKGVIFFSSILVLLSTTTCAIYSGAEFENKNIKSATFISEMFEVGPGKVAAKTFFDVQFPKGHVGIKSFDAELIDEEGNSVPLYEAYLHHWFAIKYQAKDWNMSKIIPKNPMEGANFIRNDGTCNGYILPLYWGLGGESRGTKSKIPGPYAVEHGNPSKIPFGYQEKWLLNLLIIDTRGTKDRKRCTECRCNHFNLPKNFYNTTSGIDGKPVGSSYEGGLFCCQDNLQCKLKKDFEAPTRKLALRYKITWVDWNQQQIPVRFYILDSTDRVRTNGSQVIHDCQLEFTVPPNNGRKNSAPHIEKASIPMERGGYLIYGTAHMHTGAINATLYGQDGRTLYTSKPTYGKGKEPGNEKGYVVGMSGNYPELGSIKIKDGEILLVLTKILSCFLHFDFFSTCKKRREICVSMDSETKPQIQHIINIPELIEPMLHDQCCIYKSQFRAKSRETETKKNDYMFTTSWIYKITQRDLLLLENQIPMVVFEELHKRVLLGDNNNGCNKENCVSFIELAFNYFDDYYPQKLSSKDEMIRNCKSCKHFTDLIRYSYLPREIQEKGVNPSKNFTPFRSEFVLRTATKLNEAGISFDKVQGRSFCDISFTKTPILSWFLCLGCLPCLKFVKSKLQIPHLNVDQGTECVLRNLIAFEQCHYSDQPFICNYVSLIDSLIHTHEDVELLVDTEIINHELGSHAELATLVNGLCKRVVVTSNCYGEVVKELNEHYNNWWKHYMGMLRSVYFRDPWRLSSTVVGVAIFLFAAVNFLKVIGVFSPKEAHSDLYPPTNRKNNIMATDNTSSAILSEFEMVKHIIDIEALEELSLAECSIYKVPPNLRKVKQEAYTPQLISIGPIHLGKQELQSMQQHKKRYFHFFFERLSQFNQQSMIKNYKTYLEYKEQKIRNCYAEKFPNISKEKFVETILLDAVFIMELLLRNSSWKSDKSKHEHEYVQSKSFRWKHSDDYILTQAWLSKSITRDLILLENQIPFFVLMNLYETVVPKDDKKPEHENFRDLALEYFAFYDTQKSSSSETKLVLDKNQTKKYFFVSGILGDVSSGNSISKKKNSEKSMSRFQGPKHFTDLIRFFYLPSDLGKSGCSHNFPRTVTKLMDSGVSFEKVVERRLLDITFEKKPFLSYFLCLGCLPSFSCLNHFKARLRIPQLKVDHTTECVLRNLIGLEQCQYQEQPYICNYVSLIDSLIHTQVDVDFLVEKEVIVHEMGSDKEVAMLVNGLCKHVVVNSTYYYDIINELNKHYQNIWNRTMAALWLVYFRDAWRASSTLVGIAFLVYTAFNFVRLAKVLFY 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00038 1296 PANTHER DUF247 DOMAIN PROTEIN 792 1293 - -
Tsu08g00038 1296 PANTHER DUF247 DOMAIN PROTEIN 530 767 - -
Tsu08g00038 1296 PANTHER DUF247 DOMAIN PROTEIN 446 519 - -
Tsu08g00038 1296 Pfam Plant protein of unknown function 425 756 IPR004158 -
Tsu08g00038 1296 Pfam Plant protein of unknown function 824 1281 IPR004158 -
Tsu08g00038 1296 Pfam Stress up-regulated Nod 19 35 387 IPR011692 -
Tsu08g00038 1296 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 792 1293 IPR004158 -
Tsu08g00038 1296 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 530 767 IPR004158 -
Tsu08g00038 1296 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 446 519 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00038 Tsu-Chr8 361209 375522 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00038 - - gmx:100306138 677.937