Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00036 ATGGGATCTTCTGTTGAATATCGTATCCAACAAATAATTAACATTCCAGAAAAGGTAGAACCTTCCTCTTGGCCTCAATGTTATATCTACAATGTTCCTGCTATTCTTTTGAAGGTGAAAGAAGAATCTTTTACACCTCTACTGATATCAATTGGTCCTATACACCGTAACAACGAAAAACTTAAGGGAAtgcaagaacaaaaacaaagatattttcatttcttttggaATCGTGTAGAACAGAAAAGCGATTTAATGAACTACAAAGCCTTCCTTGaacaaaaagaacaacaaaTACGCAACTGTTACCAAAAGAAATTCCCTGATATCAGTAATGAACAATTTGTTGAGATGATATTGATGGATTCTGTGTTCATCATGGAGTTGTTtctaagagaaaataaaaaatgggaaCACAAAGATGATTATATAGTGACTCAACTTTGTTTAAGCAAAAGTATTCAACGTGACTTGTTGCTTCTCGAGAATCAGCTTCCGATGTTTGTGTTGGAAAAACTATATGACACAGTTGTTCCAAGAAGTGTCAAAAACCACAATTGGTTTCTCAATCTTGCTCATGAGTATTTTGCATGTTTTTACCCTCATCGCAAGGAATCATCGGAAAAAATGTTTGAGGCGAAGATGTGGGAGAAATCACGTCATTTCACTGATTTGATTCGATGTTCTTATCTTCCTAAGAAGCTACACAATCAGAATAATGAATCTCACAAAGAGTGTTTGATGCTAAGGACTGCAACAAAGTTGAATGAAGCTGGTATAAGCTTTGAGAAGGATCATAAGAGAAGCTTACTAGACATAAAGTTTGAGAAGAAACCATTTTTGAGTTGGTTTCTTTGTCTTGGTTGCTTGCCATGTTTCAAGTGCTTCAAAGCTAGATTTCTATTTCCACAGTTAAAAGTAGACCACACGACCGAATGTGTTCTTAGGAACCTAATTGCTTTCGAGCAGTGTCATTATCCCGAAGAGCCGTACGTTTGCAATTATGTTTCTCTGGTTGATTCTCTTATTCACACCAAAGATGACGCGGAGTTGCTGGTTGAGAAAGAAGCCATTGTGCATGAGCTGGGAAGCAACGAGGAATTAACAAGTCTTGTTAACAGTCTATGCAAACATGTTGTGACGAATTCGTCATGTTATTACCAACTTATGGAAGATCTTAATGATCACTACAACAGTGAGTGGAAAAGAGCTATGGGAACATTAAGGTGGGTTTACTTCCGCGACCCTTGGAGAAGCAGTTCAACCATAGTTGGGATAGCTGTTCTAATTTTCACCATCTTCAACTTTCGTCGTGTTCTTGATCTAATGTTTTAG 1335 0.3543 MGSSVEYRIQQIINIPEKVEPSSWPQCYIYNVPAILLKVKEESFTPLLISIGPIHRNNEKLKGMQEQKQRYFHFFWNRVEQKSDLMNYKAFLEQKEQQIRNCYQKKFPDISNEQFVEMILMDSVFIMELFLRENKKWEHKDDYIVTQLCLSKSIQRDLLLLENQLPMFVLEKLYDTVVPRSVKNHNWFLNLAHEYFACFYPHRKESSEKMFEAKMWEKSRHFTDLIRCSYLPKKLHNQNNESHKECLMLRTATKLNEAGISFEKDHKRSLLDIKFEKKPFLSWFLCLGCLPCFKCFKARFLFPQLKVDHTTECVLRNLIAFEQCHYPEEPYVCNYVSLVDSLIHTKDDAELLVEKEAIVHELGSNEELTSLVNSLCKHVVTNSSCYYQLMEDLNDHYNSEWKRAMGTLRWVYFRDPWRSSSTIVGIAVLIFTIFNFRRVLDLMF 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00036 444 Pfam Plant protein of unknown function 29 430 IPR004158 -
Tsu08g00036 444 PANTHER DUF247 DOMAIN PROTEIN 5 442 - -
Tsu08g00036 444 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 5 442 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00036 Tsu-Chr8 345927 347261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00036 - - gmx:100818118 694.115