Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00035 ATGGATGTTTTTGATGGAAACAAGTTCCTTAACACTGTTCTTCTCCTAATAACAACCTTAATCGCTGCTAAACTTATTTCATCTTTCATAATCCCAAAATCAAGAAAACGATTACCCCCAATTCTTAAAGGATGGCCCATAATTGGAGGACTTCATCGTTTCCTTAAAGGTCCAATCTTTATGCTACGTGAAGAATACCCAAAACTTGGTGGTGTTTTTACTTTGaaaatttttcataaaaatattacctttttgattgGTCCTGAAGTTTCTgcacatttttttaaagctccTGAATCTGATCTTAGTCAACAAGAGGTTTATCAGTTTAATGTTCCTACTTTTGGTCCTGGTGTTGTTTTTGATGTTGATTATTCTGTTAGACAGGAACAGTTTAGGTTTTTTACTGAAGCTCTTAGAGTTAATAAACTCAAGAGTTATGTTAATCAGATGGTTACTGAAGCTGAgGACTATTTCTCAAAATGGGGACCAAGTGGTGAAGTTGATTTGAAGTATGAGCTTGAGCATCTAATCATTTTGACAGCCAGTAGATGTTTGTTGGGGCGTGAAGTTCGTGACAAGCTCTTTGATGATGTCTCTGCATTGTTCCATGACCTCGACAATGGAATGCTTCCAATCAGTGTTCTCTTCCCATACCTGCCAATCCCAGCTCACAGGCGCCGTGACAATGCACGCAAGAAGCTTGCTGAAATCTTTGCAAACATCATATCTTCACGAAAGAGTGCCGACAAAGCAGAGGACGACATGCTGCAGTGCTTCATTGACTCAAAATATAAAGATGGTCGCCCTACAACAGAAGCCGAAGTCACTGGACTCCTCATTGCCGCACTTTTCGCTGGGCAGCACACCAGTTCAATCACCTCAACTTGGACCGGAGCATATCTCTTGTGTAACAAACAGTACCTTTCTGCTGCAGTGGATGAGCAAAAGAACTTGATGGAGAAGCACGGGGATAGAGTTGATCACGATGTTTTGGCTGAGATGGATGTCTTATATAGGTGCATTAAAGAAGCCTTGAGACTCCACCCTCCATTGATTATGCTGCTTCGAAGCTCACACAGTGATTTCAGTGTCACAACAAGAGAGGGAAAAGAGTATGACATTCCCAAGGGCCATATAGTTGCTACATCTCCTGCATTTGCAAACAGGTTACCTCACATTTTCAATGACCCTGATAGGTATGATCCTGATAGGTTTGCTGTAGGGAGGGAAGAAGACAAGGCGGCAGGGGCATTCTCGTACATTTCCTTTGGAGGAGGTAGACATGGTTGCCTTGGAGAGCCATTTGCATATCTGCAGATAAAAGCAATTTGGACTCATCTTTTGAGGAACTTTGAACTTGAGCTTGTGTCACCTTTCCCTGAGATTGATTGGAATGCCATGGTTGTCGGAGTGAAAGGAAAAGTTATGGTCCGATACAAGCGGAGGGAGCTTTCTGTTAATCAATAG 1470 0.4088 MDVFDGNKFLNTVLLLITTLIAAKLISSFIIPKSRKRLPPILKGWPIIGGLHRFLKGPIFMLREEYPKLGGVFTLKIFHKNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVNQMVTEAEDYFSKWGPSGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVLFPYLPIPAHRRRDNARKKLAEIFANIISSRKSADKAEDDMLQCFIDSKYKDGRPTTEAEVTGLLIAALFAGQHTSSITSTWTGAYLLCNKQYLSAAVDEQKNLMEKHGDRVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVTTREGKEYDIPKGHIVATSPAFANRLPHIFNDPDRYDPDRFAVGREEDKAAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFELELVSPFPEIDWNAMVVGVKGKVMVRYKRRELSVNQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00035 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Tsu08g00035 489 Pfam Cytochrome P450 39 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 SUPERFAMILY Cytochrome P450 34 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 Gene3D Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PANTHER STEROL 14-DEMETHYLASE 11 482 - -
Tsu08g00035 489 PRINTS E-class P450 group IV signature 60 83 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 335 351 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 415 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 373 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PRINTS E-class P450 group IV signature 389 407 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu08g00035 489 PANTHER CYTOCHROME P450 26 11 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00035 Tsu-Chr8 342666 345563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00035 1 486 Miscellaneous Gene Families AT1G11680 82.787 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00035 K05917 - gmx:100810799 884.789