Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00033 ATGGATCCAACATCAAAAAACCAAACTCCAGAATATTACCAAAACGTCGTCGTAATGAGACACGGCGATCGCATCGACAACTTCGATCCTTTATGGATAGCCACCGCACCTCGACCGTGGGATCCACCTCTCATCAAAGAGGGTCGGGTTCGGGCTTTCTCTACGGGTCGCAAGTTTCGTAATCTTTTCGGATATCCACTTCATCGTGTTTTCGTCTCACCTTTCCTCCGCTGCATTCAGACGGCAGCTGAAGCCGTTATTGCTCTCTCAGCCGTTGATGATAACCCTGACGCACTCACCGGCGACTCTGTTACCATCGATCCTTCCAAACTCAAGGTCGCTGTTGAATATGGGTTATGTGAAATGATGAGCAGGATGGCAATTAGGCTTGAGGTGGCTCCTAAAGATGGAAATTGGGGTTTCAACATTTCAGAGTGTGAGGCCATGCTTCCAAAAGGTACCGTGGATAACACTGTAGAAAGGGTCTATAAAGAGTTGCCTGTGTGGGAGGAAGAGCTTTCGCGTACGAGGGCTAGATATGAGCAAATAGTTAAAGACCTTGCTGATAAATATCCTACTGAAAATTTGCTCCTTGTCACACATGGGGAAGGAGTCGGGGTGGCTCTATCTTCATTCAGAAAGGGTGCTGTAGTATGTGAAGTTGACTATTGTGGTTATGTGGAACTTAGACGCCCGATTTTCAAGAAAGATCAGTCATTTACTGCAGGAGAATTCGAAGTGCTTACTAATGCTGGTCAAACTGGCGTAAAATATTCCGATCTAAAAGAACTTTGA 795 0.4591 MDPTSKNQTPEYYQNVVVMRHGDRIDNFDPLWIATAPRPWDPPLIKEGRVRAFSTGRKFRNLFGYPLHRVFVSPFLRCIQTAAEAVIALSAVDDNPDALTGDSVTIDPSKLKVAVEYGLCEMMSRMAIRLEVAPKDGNWGFNISECEAMLPKGTVDNTVERVYKELPVWEEELSRTRARYEQIVKDLADKYPTENLLLVTHGEGVGVALSSFRKGAVVCEVDYCGYVELRRPIFKKDQSFTAGEFEVLTNAGQTGVKYSDLKEL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00033 264 CDD HP 16 83 - -
Tsu08g00033 264 Pfam Histidine phosphatase superfamily (branch 1) 17 86 IPR013078 -
Tsu08g00033 264 PANTHER - 5 260 - -
Tsu08g00033 264 Coils Coil 170 190 - -
Tsu08g00033 264 SMART PGAM_5 15 208 IPR013078 -
Tsu08g00033 264 PIRSF PRIB5 2 263 IPR012398 -
Tsu08g00033 264 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 5 260 - -
Tsu08g00033 264 Gene3D - 13 235 IPR029033 -
Tsu08g00033 264 SUPERFAMILY Phosphoglycerate mutase-like 15 213 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00033 Tsu-Chr8 332079 335343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00033 - - gmx:100811704 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00033 08 332079 335343 Tsu08g00033 08 332079 335343 ECH