Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00032 ATGGAGACAAAGACTCACATAGCCTTAGTTACAGTTCCTGTATACAGCCACCTTCGCTCAATTCTTGAATTCACCAAAACATTAGTTAATCTTAACCAAAACATTCATGTCACATGCATTAACCCAACATTTGGTTCTTCAATTTGTAACAATGTCAAAACCCTCTTTGAAACTCTTCCATCAAACATAAACTACATGTTCCTTCCACCAATAGATTTAGAAGACTTACCAAAAGATATCCATCCTGCACTCAAAGTTCAAGCTACTATATACCGTTCGATTCCTTCGATTGACGATGCATTGAACACATTACATTCTAGTTCGAAACTTGTCGCGGTTGTTGCCGATGGTTTAATAACTCAAGTGTTACAATTGGCCAAGAATCTCAATATTTTGGCCTATTCATATTTTCCATCCACAACCATGTTACTATCACTATGCTTGCATTCTTCAAATCTAGACAAAACAATTTCTTCCGAGTACAGAGACTTATTAGAACCATTAGAGATTCCCGGTTGCATACCGATTCAAAGTACCGATCTCCCGGATCCTATGCAAGATCGATCCAGCGAAGCGTACAAGGTTTTTCTTGAAGGTAATGATAGGTTTTATTTAGCTGATGGTGTAATGGTTAATAGCTTTCTTGCTCTTGAAGAAATGACCATAAGAGCTTTGCAACAAGAAGAGTGTGATGGAGTCCCTTCTATTTATCCAATTGGACCTTTTGTGCAAAATGAGTCATGTGATAAGGGAAGtgattttgaatatttgaaatttttggacaaacaagaaaaaaaatcaattttgtatgTTTCATTTGGAAGTGGTGGTACACTTTCTAATGAGCAAATAATTGAGCTCGCCTTTGGATTGGAATTAAGTGGTCAAAACTTTTTGTGGGTTTTTAGGCCACCAAATAAATTTGGtgttattgatgattttgatggtAGTGAATATGAGGATGatattctttttcaatttttaccaAATGGTTTTTTGGAAAGAACCAAAGGAAAAGGTTTGGTAGTTCCATATTGGGCACCACAAATTGAAATTCTTGATCATAGTTCGATTGGTGGGTTTTTATGTCATTGTGGTTGGAATTCAACACTCGAAAGTATTTTACATGGAATTCCATTAATTGCATGGCCACTTTTTGCGGAACAAAAGTTGAATGCAGCTTTGTTAAGTGATGGTTTGAAAGTAGCTATTAGGCCTAAAGTTAATGAGAAAGGTATAGTGGAAAGGGAAGAGATAGCTAAGGTTGTAAAGAATTTAATGGTTGGTGAAGAAGGAAATGGAATTAGACAAAGGATGGAAAAGGTGAAAGGTGATGCTATTGATGCTTTGAAGGAGAATGGATCTTCAACTAGGACTCTTAAACGATTGGCATTCAAATGGGAAAGTTTGGGGTCACATATAGGAATTTAA 1431 0.3452 METKTHIALVTVPVYSHLRSILEFTKTLVNLNQNIHVTCINPTFGSSICNNVKTLFETLPSNINYMFLPPIDLEDLPKDIHPALKVQATIYRSIPSIDDALNTLHSSSKLVAVVADGLITQVLQLAKNLNILAYSYFPSTTMLLSLCLHSSNLDKTISSEYRDLLEPLEIPGCIPIQSTDLPDPMQDRSSEAYKVFLEGNDRFYLADGVMVNSFLALEEMTIRALQQEECDGVPSIYPIGPFVQNESCDKGSDFEYLKFLDKQEKKSILYVSFGSGGTLSNEQIIELAFGLELSGQNFLWVFRPPNKFGVIDDFDGSEYEDDILFQFLPNGFLERTKGKGLVVPYWAPQIEILDHSSIGGFLCHCGWNSTLESILHGIPLIAWPLFAEQKLNAALLSDGLKVAIRPKVNEKGIVEREEIAKVVKNLMVGEEGNGIRQRMEKVKGDAIDALKENGSSTRTLKRLAFKWESLGSHIGI 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00032 476 Gene3D Glycogen Phosphorylase B; 6 456 - -
Tsu08g00032 476 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 465 - -
Tsu08g00032 476 CDD GT1_Gtf-like 6 443 IPR002213 GO:0008194
Tsu08g00032 476 PANTHER TRANSFERASE, PUTATIVE-RELATED 1 465 - -
Tsu08g00032 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 463 - -
Tsu08g00032 476 ProSitePatterns UDP-glycosyltransferases signature. 346 389 IPR035595 -
Tsu08g00032 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 256 397 IPR002213 GO:0008194
Tsu08g00032 476 Gene3D Glycogen Phosphorylase B; 249 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00032 Tsu-Chr8 328453 329883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00032 6 469 Glycosyltransferase AT1G01420 44.754 2.33e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00032 K08237 - gmx:100819727 687.567