Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00031 ATGGAAGCAAAAGCTCACATAGCACTTGTCTCTATTCCTGTCTTTACTCATCAAGTTTCAATACTTGAGTTTGCTAAACAACTCATTCATCTCTACAAAAACACTTTCCATGTCACATGCATCATTCCTACAATAAGTGATTCTCCATCTATTGCATCCACACCCTACTTTGATACCCTCCCTTCTAACATACAATGCATTTTTCTTCCTCCAAGTAACTTTGAGGATTTAAGGAATGATCTTATACTTGAATCTCAAATTCAAATCTCAGTTTCTAGATCTATGCCTTTAGTTTGTGAAACCTTAAAGTCAATTAATACTAGCTCTAATGTGGTTGCTATAATTGTTGATTCTTTTGCATATGAAGCACATCAATTTGCTAAGGAATTGAATATATTATCCTACAAATACTTTCCTTGTTCAGCAATGGTATTATCAATGTGCCTACACTCCTCAAAGCTAGATGAATCAATTACTTGTGAGTACAAAGATCATCCTGATCCAATAGAGATTCCAGGTTGCATAAATGTACAAGGCACAGACCTCCCAGACagttttcaaaataaatccAGCTTGGCATACAAGTTATTTCTTCACCGCTCCCAACAACTTCGTGAAGCTGATGGCATCATAATCAATAGCTTCCTTGAAATGGAATCAGAAACATTGAAAGCAATTTATCTATGTGGTACCGCACCTAATGTATATCCAATTGGACCCATCATACAAACAAGGCCCAATATTCAGAAAAATGCATGTGATGAATGTTTACTATGGTTAGATAATCAACCACCTAACTCAGTTATCTACATTTCCTTTGGAAGTGGTGGTACACTTTCACATGAACAAATTAATGAACTTGCTTTGGGATTGGAATTCAGTAACCATAAATTTTTATGGGTTAATGTGAGACCACCAAATGATAAACCAAGTGCTACTTACTTTAGTAATAATGAAGTGGACCCTTTCAATTTTTTACCTTTGGGCTTTCTACAAAGAACAAAAGGACAAGGTTTTATTATGTGTGGTTGGGCACCACAAGTTGAAGTGCTTAAACATAATGCAATTGCTGCATTTCTAACTCATTGTGGTTGGAATTCAATTTTGGAGAGTGTTGTTTATGGTGTGCCTATGATAGCTTGGCCACTATTTGCTGAACAAAGAAGCAATGCTGCATTGGTGACTAATGGTCTCAAAATTGCTATGAGACCAAAATGTAATAGCAAAGGCATAGTGGTAAAGGAGGAAGTGGCTAATACCATAAAAGGTGTAATGGAGGGTTTGGAGAGTGAAGAAATTGGAAAAAGAATGAAAGAGCTACAAAAGTTTGCTAATTGTGCAATGATGGAAAGTGGATCATCCATGAAGACCTTCTCTATGTTGGCACTCAAATGGAAGAGCTTGGGATGGTCCAAAGAAGATTGA 1425 0.3614 MEAKAHIALVSIPVFTHQVSILEFAKQLIHLYKNTFHVTCIIPTISDSPSIASTPYFDTLPSNIQCIFLPPSNFEDLRNDLILESQIQISVSRSMPLVCETLKSINTSSNVVAIIVDSFAYEAHQFAKELNILSYKYFPCSAMVLSMCLHSSKLDESITCEYKDHPDPIEIPGCINVQGTDLPDSFQNKSSLAYKLFLHRSQQLREADGIIINSFLEMESETLKAIYLCGTAPNVYPIGPIIQTRPNIQKNACDECLLWLDNQPPNSVIYISFGSGGTLSHEQINELALGLEFSNHKFLWVNVRPPNDKPSATYFSNNEVDPFNFLPLGFLQRTKGQGFIMCGWAPQVEVLKHNAIAAFLTHCGWNSILESVVYGVPMIAWPLFAEQRSNAALVTNGLKIAMRPKCNSKGIVVKEEVANTIKGVMEGLESEEIGKRMKELQKFANCAMMESGSSMKTFSMLALKWKSLGWSKED 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00031 474 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 461 - -
Tsu08g00031 474 CDD GT1_Gtf-like 5 440 IPR002213 GO:0008194
Tsu08g00031 474 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
Tsu08g00031 474 Gene3D Glycogen Phosphorylase B; 254 449 - -
Tsu08g00031 474 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Tsu08g00031 474 Gene3D Glycogen Phosphorylase B; 6 454 - -
Tsu08g00031 474 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 255 426 IPR002213 GO:0008194
Tsu08g00031 474 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00031 Tsu-Chr8 316049 319861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu08g00031 6 467 Glycosyltransferase AT1G01420 41.756 5.66e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00031 K08237 - gmx:100775351 615.535