Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00026 ATGAAGATTACCAGAAGGCAGATTGGTCTGGGCATGATTCAACAAATGCAACACGTTTGTCCTGAATGCAAAGGAACTGGTGAGGTCATTAGTGAGAGAGATAGATGCCCTCAATGCAAGGCAAACAAGATTACTCAAGAAAAGAAGGTGCTGGAAGTGCACGTGGAAAAGGGGATGCAGCAGGGTCAAAAGATTGTATTCGAAGGACAAGCTGATGAAGCTCCTGACACAATCACCGGAGACATAGTGTTTGTCTTGCAAGTGAAGGGGCATCCGAAGTTCAGGAGGGAGCATGATGACCTCCATATTGAACACACTCTCAGCTTAACTGAGGCTCTCTGTGGATTCCAGTTTAATGTCACACATCTTGATGGAAGGCAACTATTGGTCAAATCAAACCCTGGGGAAGTCGTCAAGCCAGGTCAACATAAAGCTATAAATGATGAGGGAATGCCACAACACAATAGGCCCTTCATGAGGGGACGCCTTTACATCAAGTTTAACGTTGAATTCCCAGAGTCGGGATTTCTTTCCCCTAGCCAAAGCCTAGAATTAGAAAAGGTATTACCTCAAAAGACAAGCAAGAAATTGTCACAAAAGGAGCTAGATGATTGTGAGGATACCACCTTGCATGATGTCGATCTTGCAGAGGAGATGAGTCGAAAGAAGCAACAATACCGTGAGGCAtatgatgacgatgatgatgaagacgAGCATTCAATGCCTCGGGTACAATGTGCTCAACAGTAA 750 0.4333 MKITRRQIGLGMIQQMQHVCPECKGTGEVISERDRCPQCKANKITQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTITGDIVFVLQVKGHPKFRREHDDLHIEHTLSLTEALCGFQFNVTHLDGRQLLVKSNPGEVVKPGQHKAINDEGMPQHNRPFMRGRLYIKFNVEFPESGFLSPSQSLELEKVLPQKTSKKLSQKELDDCEDTTLHDVDLAEEMSRKKQQYREAYDDDDDEDEHSMPRVQCAQQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00026 249 CDD DnaJ_C 44 174 - -
Tsu08g00026 249 SUPERFAMILY HSP40/DnaJ peptide-binding domain 94 173 IPR008971 GO:0006457|GO:0051082
Tsu08g00026 249 ProSiteProfiles Zinc finger CR-type profile. 1 48 IPR001305 GO:0031072|GO:0051082
Tsu08g00026 249 Gene3D - 2 43 - -
Tsu08g00026 249 MobiDBLite consensus disorder prediction 194 249 - -
Tsu08g00026 249 Pfam DnaJ central domain 3 42 IPR001305 GO:0031072|GO:0051082
Tsu08g00026 249 CDD DnaJ_zf 3 40 IPR001305 GO:0031072|GO:0051082
Tsu08g00026 249 Coils Coil 216 236 - -
Tsu08g00026 249 MobiDBLite consensus disorder prediction 194 229 - -
Tsu08g00026 249 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 1 249 IPR044713 GO:0006457|GO:0030544
Tsu08g00026 249 Gene3D - 91 173 - -
Tsu08g00026 249 Gene3D - 44 84 - -
Tsu08g00026 249 PANTHER CHAPERONE PROTEIN DNAJ A6 1 249 - -
Tsu08g00026 249 Pfam DnaJ C terminal domain 43 172 IPR002939 -
Tsu08g00026 249 SUPERFAMILY HSP40/DnaJ peptide-binding domain 19 97 IPR008971 GO:0006457|GO:0051082
Tsu08g00026 249 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 8 45 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00026 Tsu-Chr8 259240 261908 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00026 K09503 - gmx:100800590 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00026 08 259240 261908 Tsu08g00026 08 259240 261908 ECH