Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu08g00024 ATGGTGCAAACACCCAATTCACAGTCTGGTGAATTAACCACGCCCTTAATTGcacaatcacaatcacaatcacaatcacaGGAAGATGGTTTGACAAATGATGGGCTGATTCCTCAGATATTTTCATCTGTGCCTGCTCTCAGTGATGCTGCTTCTTATCTTTCACAAACAACCTCATACTTAGCTGGTTGTTTCTCCGACTATTCAGTAGAACATTCCCCAATACAGTCTGGTGCTTCTGACATTCGTGCGCAAGGACTCGTGGCTGTTTCTTCTGCAGAAACCGAGGCATCTACATCTACTAATATTAATCATATTTATTCAAACAGAAAGAATTTAACAAGTGTCGAATCATCTAGCACTTCAACTTCTTCACCTCTACTTATGCATGATGAAATCACAAGGATTTCTAGCAGTGACCCATTACAAAATACCAGTACACTTGTCGTTCAATCAAATAATACTGGACAAGGTGGCATTTCCATTTTCCGAGGCCTGATTGACCGCGCTCGAAGAACTGTTCGTGGATCTGCAGATGATATAGGATGGCTTCAACATGCTCAAGGAATGCCCTCGGTTGAAGATGGAACAGAGAGGTTCCAGGAAATTCTTGATGAAATCAAGCACGGTGTTCATAGGTTACCAAATTCAATGGTTTATTTATTAATTCCAGGTCTTTTCAGTAACCATGGTCCACTTTACTTTGTGAGTACCAAAGTCAGTTTTTCAAAATTGGGTTTGGCCTGTCATATTGCAAAGATTCATAGTGAgGCATCAGTTGAAAAAAATGCCAGAGAGATAAAAGAGTATATTGAGGAAATTTATTGGGGATCAAAGAAACGTGTTTTGCTTCTTGGACATAGTAAGGGAGGAGTAGATGCAGCAGCTGCTTTATCATTGTACTGGCCTGATTTGAAAGATAAAGTTGCTGGGTTGGTATTAGCACAAAGTCCCTATGGTGGTACTCCTATAGCTTCCGATCTTCTGCGAGAAGGACAGCTTGGTGATTATGTGAATTTACGGAAACTCACTGAGATTGTTATCTGTAAAGTTATTAAGGGAGACATGCGAGCCTTAGAAGACTTGACATATGAAAGGCGGAGGGAATTTCTAGAGAAGCATCATCTTCCAGAAGAACTCCCTGTTGTTTCCTTCCGCACTGAAGCTAGCGTTTCACCTGCTGTTTTAGCCACATTATCTCATGTTGCTCATGCTGAATTACCAATGGTTGCTTCAGCTGGTGAAAGTACAAAACTCCCTGTGGTGATGCCCCTAGGCGCTGCTATGGCTGCTTGTGCACAGTTACTCCAGGTGAGGTATGGCGAGAAGAGTGATGGACTTGTGACTTGCCGAGATGCAGAAGTTCCTGGATCTGTTGTGGTGCGACCTAAACGAAAATTAGACCATGCTTGGATGGTTTATTCATCGCTAAATGATGATCTTACAGAAGGAGATGCTGCACAGGTGTGTGAGGCTCTCTTATATCTACTTGTGGAAGTTGGGCAGAAAAAGAAGCATGCGTTTGCAATGAAAgatgaataa 1542 0.4118 MVQTPNSQSGELTTPLIAQSQSQSQSQEDGLTNDGLIPQIFSSVPALSDAASYLSQTTSYLAGCFSDYSVEHSPIQSGASDIRAQGLVAVSSAETEASTSTNINHIYSNRKNLTSVESSSTSTSSPLLMHDEITRISSSDPLQNTSTLVVQSNNTGQGGISIFRGLIDRARRTVRGSADDIGWLQHAQGMPSVEDGTERFQEILDEIKHGVHRLPNSMVYLLIPGLFSNHGPLYFVSTKVSFSKLGLACHIAKIHSEASVEKNAREIKEYIEEIYWGSKKRVLLLGHSKGGVDAAAALSLYWPDLKDKVAGLVLAQSPYGGTPIASDLLREGQLGDYVNLRKLTEIVICKVIKGDMRALEDLTYERRREFLEKHHLPEELPVVSFRTEASVSPAVLATLSHVAHAELPMVASAGESTKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCRDAEVPGSVVVRPKRKLDHAWMVYSSLNDDLTEGDAAQVCEALLYLLVEVGQKKKHAFAMKDE 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu08g00024 513 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 27 513 - -
Tsu08g00024 513 Gene3D alpha/beta hydrolase 218 499 IPR029058 -
Tsu08g00024 513 SUPERFAMILY alpha/beta-Hydrolases 221 349 IPR029058 -
Tsu08g00024 513 MobiDBLite consensus disorder prediction 1 34 - -
Tsu08g00024 513 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 27 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu08g00024 Tsu-Chr8 240856 247520 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu08g00024 - - mtr:MTR_8g006370 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu08g00024 08 240856 247520 Tsu08g00024 08 240856 247520 ECH