Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04425 ATGGTAATCCTTCTACTCTTTCTACTAATTACTGGTCATGTTCCAGTAATCAATGCAACTCCCCTAAGTGCTTGTTCAAATTGTGGTGATTTTGCAGTTCCATATCCACTCAGCACTAGTGATGACTGTGGTGACAAAAGGTACAAAATTTACTGCAATAATGATAGCTTAGAGTTCCTGTCAGCAACAGGAATTTACTATAAGATCCTTAAAATTTACTCAAATGCTAACAAGCTTATAATTAAACCACCTATTATACTTAAAGACACTTGTTATTCTTCTGATCTTATTGGTGGAGGCTTAGTACTTGATGAAAATTTACCCTTCAATATTTCTACATTCAACACTGTCATGCTTCTAAATTGTTCTGATAATATACTTCAATCTCCTCTTAACTGTTCTTCAAACAGTATTTGTAGACAGTTTGAGGAAAAAGTGGAGGAGGGAAATGGTTGTATAAGTACCCTTTGTTGTCATTACTTAAAAGATTCAGCTATGAATTCTCATAAGATTAGACTCAGGTTTGGGAGTTGCACTGCTTACACTTGTTTGGTGGATTTTAAGGCTGATGATCCTTTTGAAACTTGGAATTATGGGGTTGAGTTGCAATGGATTCCTCCTAATTGA 627 0.3509 MVILLLFLLITGHVPVINATPLSACSNCGDFAVPYPLSTSDDCGDKRYKIYCNNDSLEFLSATGIYYKILKIYSNANKLIIKPPIILKDTCYSSDLIGGGLVLDENLPFNISTFNTVMLLNCSDNILQSPLNCSSNSICRQFEEKVEEGNGCISTLCCHYLKDSAMNSHKIRLRFGSCTAYTCLVDFKADDPFETWNYGVELQWIPPN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04425 208 Pfam Wall-associated receptor kinase galacturonan-binding 25 80 IPR025287 GO:0030247
Tsu07g04425 208 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 5 208 - -
Tsu07g04425 208 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04425 Tsu-Chr7 49375500 49376126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04425 2 208 Receptor kinase-like Gene Family AT5G02070 35.000 9.24e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04425 - - cam:101515529 352.443