Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g04404 ATGGCATCGAAGAGGACAtcttatgatgatgatgatagtacTAAAGATCTTTCTGTTTCTAGTACTAAGCGAATCAGACATGATGATGACAACcgagaacaacaacaacaccctTTATATCGCGGTGGATTGACCGTTAACAACCCATCTGGAAGAAAATGTTTGCAATTGTGCTTCATGGACAATTTGCCTAAAAGAATTTACACACAATCTAGAATCAAAGCTGAGGGAGGTGAACCACTTCGTATTGGACTGTGGGATGCAGAAAATCAGCACATAGTGAGGGATGTGGGTTCATCGATGAAGATCCAAATTTATGTCTTAAATGGTGACTCTGAAAAAGAAGATTTCACTGCTGAGGAATTTGATAAGCAAATTGTAATTCCAAGAGTGGGAAAAGGACCACTGCTGAAAGGAGATACAGTTGTTACACCAAAAGATGGAATTGCTTACATCAACAACGTGGAGTTTACTGATATAATCAAGGGAAGAACCAATGAAGTTCGGTTAGGGGCTAAAATAGTCCCATCTAATTCAATTGGATTGGATATTAGGGAAGGTAGAAGTGAACCTTTTAGGGTCCTGAATGTTCGAGGAAAGGCTTATCAGAAACACGATCGTCCATCAATGAATGATGAGCTATGGCGTCTGAGAGGAATACGTAAAGATGGTAAACTTCAAGAGAAGTTGGCCGCACATGGAATAATAAGTGTTAAGGATTTTTTGCAGTTGTACAAAACCAATGAAGCTTCCTTAAGAGAGaaaataggcAAGATTGCAGAGAAGTCATGGAACAAAATTATTGCACATGTCAAAGAGTGTGATGTGGATGATGATGAGGAGGAAAGAGTTAAGCAACTTTCTTACAACAATTTGAATGATCTGCAACCATTGCCAATTGATAGTTTGGTTGAGACATCAACAGGTGTACAAACTGCACAATATGGTGGCCATGATCAAACTCTGCAACAATTTGATGACTTTCCAATTGATCAGCAAGGCCTACTGAATACTGATCCTACAAGCTTTGACCTATCAGAAATATGGTCATCCACCTCAACCTCACAGAGTGACCTTATAGGCTCTGAATTTTATGACCAAATGATAGCAATGGGAGAAATGCAGCCATACTTGCCTGGAGAGGGGAATATATTCTCTGAAGCATATAATTTTGATGGAGCATCACAAATTAGTCAATTTGGAAGTTACTCATTGGAACAAGTAAATGCAAATCCTATGCCCTTTGTTAATGGTGATGGAGCAGGACCTAGCAATCATTCATCTTCCCTCAACTTTGCTGTGCATATATCAAGCAATGGAAAACCGAAAAAAGATTGGCAAAAGATTCGATCAGCTCTCAAATGGTTCATGCTGTATACTAGAAAGAGGGAACAATTTTTGTTCATATATACTCCCTGA 1419 0.3756 MASKRTSYDDDDSTKDLSVSSTKRIRHDDDNREQQQHPLYRGGLTVNNPSGRKCLQLCFMDNLPKRIYTQSRIKAEGGEPLRIGLWDAENQHIVRDVGSSMKIQIYVLNGDSEKEDFTAEEFDKQIVIPRVGKGPLLKGDTVVTPKDGIAYINNVEFTDIIKGRTNEVRLGAKIVPSNSIGLDIREGRSEPFRVLNVRGKAYQKHDRPSMNDELWRLRGIRKDGKLQEKLAAHGIISVKDFLQLYKTNEASLREKIGKIAEKSWNKIIAHVKECDVDDDEEERVKQLSYNNLNDLQPLPIDSLVETSTGVQTAQYGGHDQTLQQFDDFPIDQQGLLNTDPTSFDLSEIWSSTSTSQSDLIGSEFYDQMIAMGEMQPYLPGEGNIFSEAYNFDGASQISQFGSYSLEQVNANPMPFVNGDGAGPSNHSSSLNFAVHISSNGKPKKDWQKIRSALKWFMLYTRKREQFLFIYTP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g04404 472 PANTHER CALMODULIN-BINDING PROTEIN 60 G 47 278 - -
Tsu07g04404 472 MobiDBLite consensus disorder prediction 1 36 - -
Tsu07g04404 472 PANTHER OS02G0177800 PROTEIN 282 462 IPR012416 GO:0005516
Tsu07g04404 472 PANTHER CALMODULIN-BINDING PROTEIN 60 G 282 462 - -
Tsu07g04404 472 Pfam Calmodulin binding protein central domain 210 274 IPR046830 -
Tsu07g04404 472 Pfam Calmodulin binding protein-like N-terminal domain 55 194 IPR046831 -
Tsu07g04404 472 PANTHER OS02G0177800 PROTEIN 47 278 IPR012416 GO:0005516
Tsu07g04404 472 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g04404 Tsu-Chr7 49202238 49229690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g04404 49 280 Calmodulin-binding Proteins AT5G26920 39.662 4.30e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g04404 - - mtr:MTR_7g111980 345.125